Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-263P-201ENST00000363811 107 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU6-326P-201ENST00000365480 107 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU6-417P-201ENST00000384712 107 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 MIR1203-201ENST00000408812 85 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 MIR1282-201ENST00000408865 101 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU6-651P-201ENST00000411040 105 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1135P-201ENST00000411083 103 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 MTND6P12-201ENST00000428247 522 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 HIGD1AP2-201ENST00000446367 280 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.679-201ENST00000516416 91 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RNU2-31P-201ENST00000516954 155 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC008489.1-201ENST00000524271 483 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 TOMM20P1-201ENST00000534518 427 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC096996.1-201ENST00000563813 325 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 MIR4260-201ENST00000583107 67 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 MIR6071-201ENST00000616741 78 ntBASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC116Q8IYX3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC009229.4-201ENST00000623854 1947 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC004656.1-201ENST00000568479 4951 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 RN7SKP275-201ENST00000364626 301 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 SNORD63-201ENST00000384262 68 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.590-201ENST00000410140 107 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AL133482.1-201ENST00000415988 498 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AL035660.1-201ENST00000422041 222 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 HSPD1P21-201ENST00000436541 245 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 APOOP4-201ENST00000513530 597 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 RNU7-175P-201ENST00000515915 61 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1315P-201ENST00000517187 99 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 HMGN2P36-201ENST00000529541 409 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 EDDM3DP-201ENST00000554692 434 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC103996.1-201ENST00000555468 102 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 MIR1273C-201ENST00000578669 77 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC037487.3-201ENST00000606668 112 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 MIR6861-201ENST00000618657 64 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC138965.3-201ENST00000623875 498 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 AC004076.2-201ENST00000620532 3323 ntBASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC116Q8IYX3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RNU2-61P-201ENST00000411069 191 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RN7SKP17-201ENST00000411242 351 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RPL7AP73-201ENST00000413490 353 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 IGHV5-78-201ENST00000450948 295 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RPL10P17-201ENST00000453852 316 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AP001324.2-201ENST00000461163 319 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC010326.1-201ENST00000462726 602 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RN7SL189P-201ENST00000468631 289 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RPL23AP65-201ENST00000475608 468 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RPL32P33-201ENST00000487023 394 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RN7SL184P-201ENST00000488308 297 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 DUTP1-201ENST00000493631 470 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 RNU6-612P-201ENST00000516909 102 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC021678.3-201ENST00000517893 476 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AL157871.3-201ENST00000557231 293 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms