Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC097493.1-201ENST00000463958 372 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 SRIP1-201ENST00000489235 288 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC006445.2-201ENST00000510061 472 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 RNU6-528P-201ENST00000516926 100 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 OR7K1P-201ENST00000546439 926 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AL512347.1-201ENST00000566420 503 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 MIR3921-201ENST00000577308 85 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 BNIP3P33-201ENST00000598912 569 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC024153.1-201ENST00000603103 365 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC006213.4-201ENST00000616184 634 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC027309.3-201ENST00000623419 351 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AC231657.1-201ENST00000624313 397 ntBASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.67□□□□□ -1.98
NUDCD3Q8IVD9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC080100.1-201ENST00000624239 5356 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 RNU6-560P-201ENST00000364007 108 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 Y_RNA.234-201ENST00000364409 97 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 MIR122-201ENST00000385044 85 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 RNU6-1197P-201ENST00000391183 107 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 TIMM9P2-201ENST00000419324 266 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 USP9YP11-201ENST00000427537 717 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC090774.1-201ENST00000435925 246 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 LSM1P1-201ENST00000438629 273 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 RPL31P50-201ENST00000471002 296 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 RNU6-798P-201ENST00000516912 103 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 SNORA31.22-201ENST00000517204 135 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC021451.1-201ENST00000523498 1129 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC006539.2-201ENST00000601729 572 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AP001429.1-201ENST00000602568 530 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC005014.3-201ENST00000605985 190 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AL445264.1-201ENST00000621719 171 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 AC009269.6-201ENST00000621778 588 ntBASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUDCD3Q8IVD9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NUDCD3Q8IVD9 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 DEFA7P-201ENST00000382676 285 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-76P-201ENST00000384060 104 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC007327.1-201ENST00000447461 264 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 snoU13.8-201ENST00000458890 104 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC090136.1-201ENST00000520009 240 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 MTND3P19-201ENST00000603825 345 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL160237.3-201ENST00000604114 1013 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL137843.1-201ENST00000605078 385 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL161734.1-201ENST00000609720 557 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AL357080.1-201ENST00000617394 239 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC008443.7-201ENST00000622195 246 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 MTND4P9-201ENST00000507819 1346 ntBASIC2.65□□□□□ -1.99
NUDCD3Q8IVD9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RNU5A-1-201ENST00000362698 116 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RPL23AP29-201ENST00000397284 453 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 ERHP2-201ENST00000402323 299 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms