Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RN7SKP159-201ENST00000410657 292 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 RNU2-22P-201ENST00000411266 212 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 RPL23AP22-201ENST00000437556 453 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AL353691.1-201ENST00000451332 387 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 FABP5P13-201ENST00000452144 328 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 RPL36AP13-201ENST00000457490 317 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC073073.1-201ENST00000493920 463 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.683-201ENST00000516508 93 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 CBX3P8-201ENST00000532412 525 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC004024.1-201ENST00000549244 247 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 OR1F2P-201ENST00000570470 933 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 AC243654.2-201ENST00000612843 443 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 GABPAP-201ENST00000419271 1356 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4DQ86TL0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.6□□□□□ -1.67
ATG4DQ86TL0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 Y_RNA.81-201ENST00000362997 102 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 SNORD58.1-201ENST00000391313 66 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC013442.1-201ENST00000397347 228 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 SNORA77-201ENST00000408716 125 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR1298-201ENST00000408783 112 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 RNU6-130P-201ENST00000411112 103 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL645568.3-201ENST00000433683 316 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 RPS29P9-201ENST00000440360 171 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 KNOP1P3-201ENST00000446933 426 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AP000942.1-201ENST00000463969 747 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC018437.1-201ENST00000492214 406 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 SNRPCP2-201ENST00000504370 475 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 RNU7-4P-201ENST00000516961 62 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 RN7SKP147-201ENST00000517154 244 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC109329.1-201ENST00000518744 317 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 DEFB108E-201ENST00000524692 240 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AP000859.1-201ENST00000525536 307 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 CYCSP27-201ENST00000527643 293 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC009643.1-201ENST00000532030 391 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR4436B2-201ENST00000581415 91 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR4436B1-201ENST00000583272 91 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC093227.2-201ENST00000589357 285 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 RPS29P30-201ENST00000600975 111 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL355877.2-201ENST00000603670 358 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 ELOCP5-201ENST00000604924 333 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 Mico1.1-201ENST00000611698 204 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR1244-1-201ENST00000612829 85 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC068870.2-201ENST00000620635 389 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AL589994.2-201ENST00000621124 579 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC138965.3-201ENST00000623875 498 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR1244-3-201ENST00000635744 85 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR1244-2-201ENST00000636449 85 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 MIR1244-4-202ENST00000636813 85 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 AC083843.2-201ENST00000568248 6253 ntBASIC4.59□□□□□ -1.67
ATG4DQ86TL0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ATG4DQ86TL0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ATG4DQ86TL0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 MUC2-202ENST00000613187 4845 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms