Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PRO1804-201ENST00000623780 2050 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 OR5J1P-201ENST00000313544 939 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 RNA5SP258-201ENST00000362750 119 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-1085P-201ENST00000363576 107 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-534P-201ENST00000364877 106 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-359P-201ENST00000365466 108 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 SNORD82-201ENST00000365530 70 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 BTBD10P2-201ENST00000404779 676 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL139413.1-201ENST00000421309 217 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 MTND5P20-201ENST00000448677 143 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 MTND3P10-201ENST00000450967 341 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC025678.1-201ENST00000567861 338 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC099489.2-201ENST00000574976 260 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC090615.1-201ENST00000577519 154 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC010680.3-201ENST00000604215 520 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC006077.1-201ENST00000604746 343 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL161734.1-201ENST00000609720 557 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AL355472.4-201ENST00000610233 626 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC069234.5-201ENST00000611056 416 ntBASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3BQ7Z3V4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RNU5E-1-201ENST00000362477 120 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 Y_RNA.89-201ENST00000363031 102 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 SNORA72.1-201ENST00000363485 129 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-282P-201ENST00000365357 103 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 HSPE1P8-201ENST00000406997 288 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC127391.1-201ENST00000411737 98 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RPS15AP40-201ENST00000419621 391 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 MTCO1P20-201ENST00000425366 358 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 ZNF863P-201ENST00000426746 417 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC108734.1-201ENST00000439549 399 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 DPPA3P1-201ENST00000448050 469 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 snoU13.8-201ENST00000458890 104 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC008155.2-201ENST00000464337 397 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC025518.1-201ENST00000479856 347 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RPS29P25-201ENST00000481709 171 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RPL23AP41-201ENST00000484754 458 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-358P-201ENST00000516564 75 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 RN7SKP82-201ENST00000516786 223 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 SNORA20.3-201ENST00000516880 132 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AP003072.2-201ENST00000527756 676 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 ADI1P3-201ENST00000549509 470 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AL512360.1-201ENST00000555346 234 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AL356432.3-201ENST00000568952 465 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC008752.3-201ENST00000588113 712 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC007179.3-201ENST00000604976 235 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC121334.2-201ENST00000605387 271 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC113194.1-201ENST00000606037 500 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 MIR98-201ENST00000606724 119 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AP001330.5-201ENST00000607176 411 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AL133173.2-201ENST00000614270 90 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC012150.2-201ENST00000621300 544 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 AC091953.2-201ENST00000623979 160 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 LRRC77P-213ENST00000637727 880 ntBASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3BQ7Z3V4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms