Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AL590084.2-201ENST00000401481 382 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MIR1290-201ENST00000408735 78 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MTND1P21-201ENST00000412991 285 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 RPL23AP69-201ENST00000431134 458 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 TPT1P14-201ENST00000448018 505 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 RPL36AP33-201ENST00000450395 310 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 OR6K1P-201ENST00000456766 971 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC068587.4-201ENST00000533893 186 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 SETP2-201ENST00000553886 926 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC005951.2-201ENST00000576282 495 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 ISCA1P3-201ENST00000577104 373 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MIR4429-201ENST00000580105 73 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AL357094.1-201ENST00000603845 844 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AP002791.1-201ENST00000623291 381 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC017037.3-201ENST00000625016 472 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC019226.1-201ENST00000625666 515 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MTND5P33-201ENST00000571250 1450 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 OR4G2P-202ENST00000641004 1759 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
CASC4Q6P4E1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
CASC4Q6P4E1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 RNU6-660P-201ENST00000364566 109 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 SNORA23-201ENST00000365128 182 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 SNORA1.3-201ENST00000384676 136 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 RNU6-754P-201ENST00000391166 107 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AL359704.1-201ENST00000411586 781 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 HMGB1P11-201ENST00000413899 637 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC008850.1-201ENST00000427546 362 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 RPL32P34-201ENST00000486380 400 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC135721.1-201ENST00000497954 479 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC110794.1-201ENST00000505816 425 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 GMPSP1-201ENST00000514075 579 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 RN7SKP282-201ENST00000516824 299 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC013553.2-201ENST00000604244 589 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AC027309.3-201ENST00000623419 351 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 AP000676.4-201ENST00000624659 623 ntBASIC3.18□□□□□ -1.9
CASC4Q6P4E1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CASC4Q6P4E1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 RNA5SP72-201ENST00000364442 117 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 RNU1-39P-201ENST00000383897 165 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC119751.3-201ENST00000399720 670 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC110754.1-201ENST00000399740 601 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 RAP1BP1-201ENST00000412709 553 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 ATG12P2-201ENST00000456830 416 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC008155.2-201ENST00000464337 397 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 TTC39CP1-201ENST00000512513 755 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.17□□□□□ -1.9
CASC4Q6P4E1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.17□□□□□ -1.9
CASC4Q6P4E1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms