Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC010300.1-201ENST00000600671 5134 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-1252P-201ENST00000363054 104 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 SNORD113-7-201ENST00000363762 77 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 SNORA62.3-201ENST00000365110 153 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 SNORA70.4-201ENST00000365509 134 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 U3.29-201ENST00000391296 212 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RNU4-14P-201ENST00000410858 122 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AL356095.1-201ENST00000417217 199 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 EZH2P1-201ENST00000431167 291 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RPL23AP52-201ENST00000439311 478 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC016696.1-201ENST00000446949 318 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RNU7-66P-201ENST00000459469 62 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RN7SKP82-201ENST00000516786 223 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-64P-201ENST00000517119 105 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AL163153.1-201ENST00000554223 283 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 MIR4790-201ENST00000577799 79 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 BNIP3P25-201ENST00000596023 559 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 MIR6867-201ENST00000610636 67 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC093838.1-201ENST00000613014 469 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC005086.4-201ENST00000623065 213 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC011155.2-201ENST00000623202 216 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC140479.6-201ENST00000633535 357 ntBASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 RNA5SP107-201ENST00000411358 122 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 BX323014.1-201ENST00000412876 237 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 RPS3AP52-201ENST00000435639 297 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 RPL36AP6-201ENST00000435770 321 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 RPL35AP22-201ENST00000436855 335 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AL358232.1-201ENST00000448030 501 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 ST13P14-201ENST00000474095 734 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC008958.1-201ENST00000511047 682 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 HMGN1P28-201ENST00000521340 364 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 MIR5583-1-201ENST00000580941 59 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 RN7SL600P-201ENST00000581811 299 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 MIR4512-201ENST00000583257 77 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 CYP2C61P-201ENST00000604072 290 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC019193.3-201ENST00000609144 554 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC112484.5-201ENST00000624189 228 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AL078596.1-201ENST00000624856 447 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC091925.2-201ENST00000625059 256 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 SAGE2P-201ENST00000420011 2126 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 MFSD8-242ENST00000641690 4199 ntBASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PRPF40BQ6NWY9 AC083843.3-201ENST00000623679 2186 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 ZNF734P-201ENST00000419494 1534 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC090229.1-201ENST00000590983 1609 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 MIR548K-201ENST00000408406 116 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 CYCSP19-201ENST00000411715 316 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 SNORD97-201ENST00000459187 142 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 RN7SL691P-201ENST00000494487 301 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms