Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4□□□□□ -1.77
RNF220Q5VTB9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4□□□□□ -1.77
RNF220Q5VTB9 AC002545.1-201ENST00000592511 181 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4□□□□□ -1.77
RNF220Q5VTB9 DPPA3P3-201ENST00000603842 430 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC104763.2-201ENST00000604179 382 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4□□□□□ -1.77
RNF220Q5VTB9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4□□□□□ -1.77
RNF220Q5VTB9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RNF220Q5VTB9 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 AC093648.1-201ENST00000623546 606 ntBASIC4□□□□□ -1.77
RNF220Q5VTB9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4□□□□□ -1.77
RNF220Q5VTB9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF220Q5VTB9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 OR5P1P-201ENST00000299512 925 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RNU6-179P-201ENST00000363350 107 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RN7SKP103-201ENST00000363848 320 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL590139.1-201ENST00000416267 400 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 MRPL50P2-201ENST00000416821 482 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 HMGB3P20-201ENST00000417997 600 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL139095.3-201ENST00000419672 1203 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 HMGB1P27-201ENST00000431429 603 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 ARL2BPP10-201ENST00000446487 531 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC003071.1-201ENST00000451219 789 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL356010.1-201ENST00000456364 102 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RPL9P32-201ENST00000464118 620 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AP001086.1-201ENST00000494882 321 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 SNORA31.3-201ENST00000516029 96 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RNU1-61P-201ENST00000516107 151 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RNU6-927P-201ENST00000516199 100 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC104383.1-201ENST00000530297 370 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 OR5BN1P-201ENST00000532955 829 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL157687.1-201ENST00000554853 619 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL109766.1-201ENST00000555080 552 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC025678.1-201ENST00000567861 338 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC067852.3-201ENST00000589177 561 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC010591.1-201ENST00000603941 649 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AP001596.2-201ENST00000608410 312 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL365204.3-201ENST00000612448 685 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AL021997.2-201ENST00000615674 271 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 AC007546.1-201ENST00000619452 559 ntBASIC3.99□□□□□ -1.77
RNF220Q5VTB9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF220Q5VTB9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 Y_RNA.450-201ENST00000384198 113 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RNU6-780P-201ENST00000391030 104 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC068050.1-201ENST00000394891 380 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 BTF3P7-201ENST00000407097 488 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AL356387.2-201ENST00000422272 243 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RPL7P54-201ENST00000438336 674 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RNU7-182P-201ENST00000459009 62 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RNU6-953P-201ENST00000459154 107 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 MRPS17P3-201ENST00000465453 385 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RPL35AP15-201ENST00000468042 339 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC006512.1-201ENST00000468816 291 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RPL21P126-201ENST00000470049 478 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 RNU6-718P-201ENST00000516166 105 ntBASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF220Q5VTB9 AK6P1-201ENST00000540219 478 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms