Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC091057.2-201ENST00000602594 792 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 HSPE1P26-201ENST00000405341 275 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AC092155.2-201ENST00000454675 477 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AC034222.1-201ENST00000494052 532 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AP001804.3-201ENST00000525146 880 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AL136164.4-201ENST00000625013 2135 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 PTP4A1P1-201ENST00000420539 515 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC140725.3-201ENST00000616193 880 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MIR6788-201ENST00000618842 66 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 DUXAP9-208ENST00000622815 614 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RNA5SP492-201ENST00000411330 114 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MTND2P16-201ENST00000419987 799 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RNU1-40P-201ENST00000516816 164 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RNU1-97P-201ENST00000516872 164 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 CDC27P3-201ENST00000635418 1910 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RNU4-51P-201ENST00000364206 140 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RPL7P31-201ENST00000450192 724 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 SNRPFP4-201ENST00000456366 242 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC011468.4-201ENST00000603942 409 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MIR625-201ENST00000385047 85 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RPL23AP47-201ENST00000408017 460 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 RPL35AP22-201ENST00000436855 335 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AC096992.1-201ENST00000459808 709 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 SNORA31.24-201ENST00000517232 57 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 AP004607.1-201ENST00000524456 203 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
VPS13DQ5THJ4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC008568.2-201ENST00000623862 2313 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 MTND5P25-201ENST00000430499 799 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 CALM1P1-201ENST00000442082 433 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 RPL21P134-201ENST00000453468 483 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 RPL21P131-201ENST00000497298 483 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC099336.2-201ENST00000422457 254 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 CKS1BP5-201ENST00000434172 273 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 RPS26P56-201ENST00000444468 240 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC011979.1-201ENST00000472300 483 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 RPL21P93-201ENST00000480465 489 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC233702.1-201ENST00000482905 502 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC093591.1-201ENST00000491435 481 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC114546.3-201ENST00000623582 1734 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 MTND5P12-201ENST00000502851 1449 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 PABPC1P7-201ENST00000413177 1513 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 MCTS2P-201ENST00000394552 546 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 MIR98-201ENST00000606724 119 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AL592494.3-201ENST00000609485 464 ntBASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
VPS13DQ5THJ4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 HSPE1P20-201ENST00000538133 289 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AC098848.2-201ENST00000588023 330 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 ZNF209P-201ENST00000593450 2304 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU2-32P-201ENST00000411193 191 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 MORF4L1P7-201ENST00000426038 703 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 KATNBL1P3-201ENST00000443475 909 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 BNIP3P4-201ENST00000604946 565 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 DDX10P1-201ENST00000448545 1933 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-1320P-201ENST00000390838 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 RNU6-1269P-201ENST00000391139 107 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 Z85995.1-201ENST00000415547 335 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 VN1R96P-201ENST00000446052 858 ntBASIC0.94□□□□□ -2.26
VPS13DQ5THJ4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms