Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AC121761.2-201ENST00000617300 689 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AL158801.5-201ENST00000623123 465 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 AL133216.2-202ENST00000634512 349 ntBASIC2.03□□□□□ -2.09
NUP188Q5SRE5 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.02□□□□□ -2.09
NUP188Q5SRE5 RPS29P1-201ENST00000465274 159 ntBASIC2.02□□□□□ -2.09
NUP188Q5SRE5 RPL21P131-201ENST00000497298 483 ntBASIC2.02□□□□□ -2.09
NUP188Q5SRE5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP188Q5SRE5 AC091057.2-201ENST00000602594 792 ntBASIC2.02□□□□□ -2.09
NUP188Q5SRE5 YWHAQP7-201ENST00000603536 658 ntBASIC2.02□□□□□ -2.09
NUP188Q5SRE5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NUP188Q5SRE5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 RNU4-51P-201ENST00000364206 140 ntBASIC2.01□□□□□ -2.09
NUP188Q5SRE5 RNA5SP105-201ENST00000391123 113 ntBASIC2.01□□□□□ -2.09
NUP188Q5SRE5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
NUP188Q5SRE5 AC098679.5-201ENST00000624394 571 ntBASIC2.01□□□□□ -2.09
NUP188Q5SRE5 ZNF209P-201ENST00000593450 2304 ntBASIC2.01□□□□□ -2.09
NUP188Q5SRE5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2□□□□□ -2.09
NUP188Q5SRE5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2□□□□□ -2.09
NUP188Q5SRE5 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2□□□□□ -2.09
NUP188Q5SRE5 TRAV28-201ENST00000557548 323 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2□□□□□ -2.09
NUP188Q5SRE5 AC010928.2-201ENST00000588017 287 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 CDC27P3-201ENST00000635418 1910 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 PABPC1P9-201ENST00000426076 1612 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 RNU4-7P-201ENST00000364758 141 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 ANAPC10P1-201ENST00000395991 556 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 MTCYBP7-201ENST00000419540 1134 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 RFESDP1-201ENST00000422350 461 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
NUP188Q5SRE5 MTCYBP45-201ENST00000435243 565 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 RNU6-1218P-201ENST00000458990 108 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 HMGN1P8-201ENST00000463578 288 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 MTND3P6-201ENST00000485242 339 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 MIR4285-201ENST00000581001 85 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 MTATP6P3-201ENST00000581686 676 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 MIR6788-201ENST00000618842 66 ntBASIC2□□□□□ -2.09
NUP188Q5SRE5 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 RNU6-225P-201ENST00000384613 103 ntBASIC1.99□□□□□ -2.09
NUP188Q5SRE5 SNRPEP2-201ENST00000397592 279 ntBASIC1.99□□□□□ -2.09
NUP188Q5SRE5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 AC084851.1-201ENST00000529105 249 ntBASIC1.99□□□□□ -2.09
NUP188Q5SRE5 MTND2P17-201ENST00000550281 688 ntBASIC1.99□□□□□ -2.09
NUP188Q5SRE5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP188Q5SRE5 AC002546.1-201ENST00000588041 2504 ntBASIC1.99□□□□□ -2.09
NUP188Q5SRE5 DDX10P1-201ENST00000448545 1933 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 RNU1-22P-201ENST00000363334 158 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 SNORD56.5-201ENST00000364281 72 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 AC007115.1-201ENST00000546853 234 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 AL391646.1-201ENST00000603860 190 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 AC006249.1-201ENST00000621223 471 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 MTND4P34-201ENST00000572715 1371 ntBASIC1.98□□□□□ -2.09
NUP188Q5SRE5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP188Q5SRE5 snoU109.4-201ENST00000458953 143 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 SNORA31.24-201ENST00000517232 57 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AC022634.1-201ENST00000520765 532 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 OR4K8P-201ENST00000578842 1048 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AL589935.2-201ENST00000616471 1231 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 U73479.1-201ENST00000618062 168 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AL157700.1-201ENST00000561973 1432 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 RNU4-41P-201ENST00000364426 143 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 TPMTP3-201ENST00000411928 735 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP188Q5SRE5 PSMA2P3-201ENST00000429685 675 ntBASIC1.97□□□□□ -2.09
NUP188Q5SRE5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms