Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 MIR3611-201ENST00000584484 83 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC109347.2-201ENST00000610220 349 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC138932.5-201ENST00000617759 563 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC092656.1-203ENST00000624134 423 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC38Q502W7 RNY4P34-201ENST00000364779 95 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 RNU6-348P-201ENST00000384386 107 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 MIR493-201ENST00000385254 89 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC38Q502W7 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL591034.1-201ENST00000407447 340 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC002075.2-201ENST00000425207 252 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC137499.1-201ENST00000427602 88 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL031667.1-201ENST00000440222 725 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC114755.5-201ENST00000447760 831 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 GAPDHP17-201ENST00000449858 1001 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 RAP1BP2-201ENST00000478270 544 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 RPL31P60-201ENST00000478450 367 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC026784.1-201ENST00000507986 352 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 MTND3P5-201ENST00000512798 333 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 RNU6-390P-201ENST00000516259 103 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 SNORA18.6-201ENST00000516792 115 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC135279.1-201ENST00000543493 504 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC093012.1-202ENST00000549403 582 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC007224.1-201ENST00000564410 144 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC005951.2-201ENST00000576282 495 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 NRBF2P1-201ENST00000587407 859 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC100793.4-201ENST00000613683 429 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 ZYXP1-201ENST00000617638 118 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC006338.1-201ENST00000618453 749 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 AC112484.5-201ENST00000624189 228 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 U6.98-201ENST00000637157 84 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 MIR492-201ENST00000638676 116 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC38Q502W7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC38Q502W7 OR4G2P-202ENST00000641004 1759 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 AP001148.1-201ENST00000624124 2359 ntBASIC3.94□□□□□ -1.78
CCDC38Q502W7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC38Q502W7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC073073.2-201ENST00000609827 2578 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 MIR372-201ENST00000362225 67 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AL359634.1-202ENST00000404721 284 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC073614.1-201ENST00000438690 650 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 USP9YP15-201ENST00000442391 422 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 NANOGP10-201ENST00000453325 895 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 RPS27AP1-201ENST00000475545 471 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 RNA5SP337-201ENST00000517007 109 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC011979.2-201ENST00000527568 352 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 MIR4528-201ENST00000577763 90 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AC015871.2-201ENST00000603605 948 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 AP000860.1-201ENST00000605250 559 ntBASIC3.93□□□□□ -1.78
CCDC38Q502W7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC38Q502W7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC38Q502W7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC38Q502W7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 ZNF807-201ENST00000328088 1707 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CCDC38Q502W7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC38Q502W7 RNU5E-1-201ENST00000362477 120 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 U3.11-201ENST00000364476 212 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 Y_RNA.318-201ENST00000365131 97 ntBASIC3.92□□□□□ -1.78
CCDC38Q502W7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms