Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX7Q2KHR2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX7Q2KHR2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX7Q2KHR2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX7Q2KHR2 AC068790.3-201ENST00000602988 553 ntBASIC2.21□□□□□ -2.06
RFX7Q2KHR2 AL136363.1-201ENST00000605349 337 ntBASIC2.21□□□□□ -2.06
RFX7Q2KHR2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX7Q2KHR2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFX7Q2KHR2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFX7Q2KHR2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX7Q2KHR2 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 XKRY2-201ENST00000442362 1093 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 AC008427.1-201ENST00000503102 655 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 RNU6-250P-201ENST00000516958 103 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX7Q2KHR2 snoU13.31-201ENST00000607291 104 ntBASIC2.2□□□□□ -2.06
RFX7Q2KHR2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 RPS4XP3-201ENST00000398541 413 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC009414.1-201ENST00000427200 443 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC114973.1-201ENST00000429057 632 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL135752.1-201ENST00000479477 471 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC007375.1-201ENST00000554513 578 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 FAM60CP-201ENST00000591086 664 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.6-201ENST00000603753 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.11-201ENST00000604059 253 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.10-201ENST00000604330 253 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC008162.1-201ENST00000604718 254 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.1-201ENST00000604752 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL009028.1-201ENST00000604895 802 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.2-201ENST00000604983 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.5-201ENST00000605253 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.4-201ENST00000605279 254 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.12-201ENST00000605291 253 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.8-201ENST00000605353 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.9-201ENST00000605428 253 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AL670379.7-201ENST00000605823 252 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX7Q2KHR2 AC008669.1-201ENST00000565823 2178 ntBASIC2.19□□□□□ -2.06
RFX7Q2KHR2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 Y_RNA.118-201ENST00000363300 101 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 SFR1P1-201ENST00000403720 688 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 MTCO3P12-201ENST00000416718 547 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AL590762.3-201ENST00000436372 640 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 NDUFB4P6-201ENST00000436819 366 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC011352.3-201ENST00000505162 593 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC133963.2-201ENST00000513686 578 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 RNU6-1308P-201ENST00000516817 103 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC128687.1-201ENST00000605304 619 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC108479.2-201ENST00000617314 601 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AL590410.1-201ENST00000617925 333 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 AC068880.5-201ENST00000624331 290 ntBASIC2.18□□□□□ -2.06
RFX7Q2KHR2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX7Q2KHR2 HMGB1P5-201ENST00000255320 642 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 MIR378A-201ENST00000362177 66 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 RNU6-457P-201ENST00000363999 107 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 RNA5SP190-201ENST00000365222 118 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 NPM1P10-201ENST00000398310 865 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX7Q2KHR2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX7Q2KHR2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX7Q2KHR2 snoU13.7-201ENST00000459220 104 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
RFX7Q2KHR2 MTCO2P9-201ENST00000503214 694 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 OR5BM1P-201ENST00000512021 366 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 AC011611.5-201ENST00000552477 578 ntBASIC2.17□□□□□ -2.06
RFX7Q2KHR2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX7Q2KHR2 AC107954.1-201ENST00000565906 727 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms