Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 SNORA31.9-201ENST00000516429 84 ntBASIC3.75□□□□□ -1.81
RAE1P78406 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
RAE1P78406 HMGB1P41-201ENST00000520234 440 ntBASIC3.75□□□□□ -1.81
RAE1P78406 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 AC123904.3-201ENST00000547218 814 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.75□□□□□ -1.81
RAE1P78406 AC125611.2-201ENST00000551907 647 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AL121579.1-201ENST00000555129 305 ntBASIC3.75□□□□□ -1.81
RAE1P78406 BNIP3P5-201ENST00000562290 498 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AL360157.1-201ENST00000565962 87 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
RAE1P78406 YWHAEP7-203ENST00000622054 312 ntBASIC3.75□□□□□ -1.81
RAE1P78406 AP003122.6-201ENST00000623831 495 ntBASIC3.75□□□□□ -1.81
RAE1P78406 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.75□□□□□ -1.81
RAE1P78406 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.75□□□□□ -1.81
RAE1P78406 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.75□□□□□ -1.81
RAE1P78406 PNPT1P2-201ENST00000456768 2050 ntBASIC3.75□□□□□ -1.81
RAE1P78406 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.75□□□□□ -1.81
RAE1P78406 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RAE1P78406 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 RNU6-451P-201ENST00000362921 107 ntBASIC3.74□□□□□ -1.81
RAE1P78406 SNORA69-201ENST00000383895 132 ntBASIC3.74□□□□□ -1.81
RAE1P78406 MIR454-201ENST00000390180 115 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AL359634.1-202ENST00000404721 284 ntBASIC3.74□□□□□ -1.81
RAE1P78406 RNU2-39P-201ENST00000410604 198 ntBASIC3.74□□□□□ -1.81
RAE1P78406 RNU4-6P-201ENST00000410804 122 ntBASIC3.74□□□□□ -1.81
RAE1P78406 OR51A5P-201ENST00000415429 942 ntBASIC3.74□□□□□ -1.81
RAE1P78406 RPL30P16-201ENST00000419341 429 ntBASIC3.74□□□□□ -1.81
RAE1P78406 PPP1R11P2-201ENST00000423543 382 ntBASIC3.74□□□□□ -1.81
RAE1P78406 GTF2IP20-201ENST00000431663 360 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.74□□□□□ -1.81
RAE1P78406 RANP8-201ENST00000444720 713 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.74□□□□□ -1.81
RAE1P78406 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.74□□□□□ -1.81
RAE1P78406 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.74□□□□□ -1.81
RAE1P78406 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 AP001646.1-201ENST00000527936 915 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.74□□□□□ -1.81
RAE1P78406 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.74□□□□□ -1.81
RAE1P78406 AC055876.1-202ENST00000567053 138 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.74□□□□□ -1.81
RAE1P78406 AC012443.1-201ENST00000605605 231 ntBASIC3.74□□□□□ -1.81
RAE1P78406 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 AC015967.1-201ENST00000619893 476 ntBASIC3.74□□□□□ -1.81
RAE1P78406 MIR6758-201ENST00000620653 63 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.74□□□□□ -1.81
RAE1P78406 MIR3662-201ENST00000637030 95 ntBASIC3.74□□□□□ -1.81
RAE1P78406 AC138649.5-201ENST00000637456 137 ntBASIC3.74□□□□□ -1.81
RAE1P78406 MIR492-201ENST00000638676 116 ntBASIC3.74□□□□□ -1.81
RAE1P78406 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RAE1P78406 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 RLIMP1-201ENST00000339626 1680 ntBASIC3.74□□□□□ -1.81
RAE1P78406 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RAE1P78406 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RAE1P78406 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
RAE1P78406 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.73□□□□□ -1.81
RAE1P78406 EXOC5P1-201ENST00000510543 1969 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC073343.1-201ENST00000328239 651 ntBASIC3.73□□□□□ -1.81
RAE1P78406 RN7SKP44-201ENST00000363602 316 ntBASIC3.73□□□□□ -1.81
RAE1P78406 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RAE1P78406 RNU6-1074P-201ENST00000383995 104 ntBASIC3.73□□□□□ -1.81
RAE1P78406 RNU6-641P-201ENST00000384006 107 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC138393.2-201ENST00000414742 246 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.73□□□□□ -1.81
RAE1P78406 SDCBPP3-201ENST00000419629 891 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.73□□□□□ -1.81
RAE1P78406 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RAE1P78406 AL691449.1-201ENST00000426570 421 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.73□□□□□ -1.81
RAE1P78406 AF228730.2-201ENST00000438784 848 ntBASIC3.73□□□□□ -1.81
RAE1P78406 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.73□□□□□ -1.81
RAE1P78406 AC114755.5-201ENST00000447760 831 ntBASIC3.73□□□□□ -1.81
RAE1P78406 MTND3P10-201ENST00000450967 341 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.73□□□□□ -1.81
RAE1P78406 AC126389.1-201ENST00000477436 290 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC233702.1-201ENST00000482905 502 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
RAE1P78406 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.73□□□□□ -1.81
RAE1P78406 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RAE1P78406 PCBP2P3-201ENST00000509726 843 ntBASIC3.73□□□□□ -1.81
RAE1P78406 SNORA20.3-201ENST00000516880 132 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.73□□□□□ -1.81
RAE1P78406 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
RAE1P78406 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.73□□□□□ -1.81
RAE1P78406 CBX3P5-201ENST00000552017 521 ntBASIC3.73□□□□□ -1.81
RAE1P78406 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.73□□□□□ -1.81
RAE1P78406 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms