Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.64□□□□□ -2.15
UBA52P62987 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.64□□□□□ -2.15
UBA52P62987 AC093281.2-201ENST00000510153 597 ntBASIC1.64□□□□□ -2.15
UBA52P62987 HMGB1P1-201ENST00000522557 636 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.64□□□□□ -2.15
UBA52P62987 AC118942.1-201ENST00000529674 1035 ntBASIC1.64□□□□□ -2.15
UBA52P62987 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
UBA52P62987 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.64□□□□□ -2.15
UBA52P62987 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.64□□□□□ -2.15
UBA52P62987 AL096840.1-201ENST00000603287 93 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AC107214.2-201ENST00000608204 634 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AC005332.10-201ENST00000612725 619 ntBASIC1.64□□□□□ -2.15
UBA52P62987 Y_RNA.783-201ENST00000613546 102 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AC025016.1-201ENST00000616746 682 ntBASIC1.64□□□□□ -2.15
UBA52P62987 OR1S1-201ENST00000624470 978 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.64□□□□□ -2.15
UBA52P62987 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.64□□□□□ -2.15
UBA52P62987 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.64□□□□□ -2.15
UBA52P62987 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBA52P62987 AC080128.1-201ENST00000474389 1917 ntBASIC1.64□□□□□ -2.15
UBA52P62987 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBA52P62987 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.63□□□□□ -2.15
UBA52P62987 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UBA52P62987 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBA52P62987 RNU6-234P-201ENST00000365229 104 ntBASIC1.63□□□□□ -2.15
UBA52P62987 RNA5SP213-201ENST00000391031 106 ntBASIC1.63□□□□□ -2.15
UBA52P62987 SPA17P1-201ENST00000416656 452 ntBASIC1.63□□□□□ -2.15
UBA52P62987 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
UBA52P62987 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.63□□□□□ -2.15
UBA52P62987 AC009296.1-201ENST00000443146 155 ntBASIC1.63□□□□□ -2.15
UBA52P62987 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.63□□□□□ -2.15
UBA52P62987 snoU13.3-201ENST00000459441 104 ntBASIC1.63□□□□□ -2.15
UBA52P62987 EIF4EP3-201ENST00000498782 656 ntBASIC1.63□□□□□ -2.15
UBA52P62987 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.63□□□□□ -2.15
UBA52P62987 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBA52P62987 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.63□□□□□ -2.15
UBA52P62987 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
UBA52P62987 BTF3P12-201ENST00000519620 469 ntBASIC1.63□□□□□ -2.15
UBA52P62987 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.63□□□□□ -2.15
UBA52P62987 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
UBA52P62987 AP001004.1-201ENST00000582468 324 ntBASIC1.63□□□□□ -2.15
UBA52P62987 AC120053.1-201ENST00000607706 736 ntBASIC1.63□□□□□ -2.15
UBA52P62987 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.63□□□□□ -2.15
UBA52P62987 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.63□□□□□ -2.15
UBA52P62987 AL137003.2-201ENST00000606924 2538 ntBASIC1.63□□□□□ -2.15
UBA52P62987 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBA52P62987 RNU6-837P-201ENST00000391056 108 ntBASIC1.62□□□□□ -2.15
UBA52P62987 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UBA52P62987 AC234782.4-201ENST00000417646 1048 ntBASIC1.62□□□□□ -2.15
UBA52P62987 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.62□□□□□ -2.15
UBA52P62987 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 ISCA1P6-201ENST00000427740 390 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.62□□□□□ -2.15
UBA52P62987 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.62□□□□□ -2.15
UBA52P62987 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
UBA52P62987 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.62□□□□□ -2.15
UBA52P62987 FAM92A1P2-202ENST00000504766 877 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 OR4V1P-201ENST00000525394 1140 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AK6P1-201ENST00000540219 478 ntBASIC1.62□□□□□ -2.15
UBA52P62987 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBA52P62987 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 AC107954.1-201ENST00000565906 727 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.62□□□□□ -2.15
UBA52P62987 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
UBA52P62987 HSPE1P7-201ENST00000604681 321 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AP001521.1-201ENST00000609150 300 ntBASIC1.62□□□□□ -2.15
UBA52P62987 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.62□□□□□ -2.15
UBA52P62987 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UBA52P62987 AP001486.3-201ENST00000615334 372 ntBASIC1.62□□□□□ -2.15
UBA52P62987 RMST_5.1-201ENST00000618704 126 ntBASIC1.62□□□□□ -2.15
UBA52P62987 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.62□□□□□ -2.15
UBA52P62987 AL049737.1-201ENST00000413920 1403 ntBASIC1.62□□□□□ -2.15
UBA52P62987 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
UBA52P62987 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBA52P62987 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UBA52P62987 AC103710.2-202ENST00000641454 2853 ntBASIC1.61□□□□□ -2.15
UBA52P62987 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.61□□□□□ -2.15
UBA52P62987 ADAM3A-203ENST00000461344 2157 ntBASIC1.61□□□□□ -2.15
UBA52P62987 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBA52P62987 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
UBA52P62987 Y_RNA.164-201ENST00000363709 102 ntBASIC1.61□□□□□ -2.15
UBA52P62987 SNORA38-201ENST00000363946 132 ntBASIC1.61□□□□□ -2.15
UBA52P62987 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBA52P62987 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBA52P62987 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBA52P62987 AL023807.1-201ENST00000407932 359 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AL450338.1-201ENST00000407987 512 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AL139156.1-201ENST00000412785 841 ntBASIC1.61□□□□□ -2.15
UBA52P62987 RPL23AP36-201ENST00000413895 458 ntBASIC1.61□□□□□ -2.15
UBA52P62987 AL445685.2-201ENST00000422551 342 ntBASIC1.61□□□□□ -2.15
UBA52P62987 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.61□□□□□ -2.15
UBA52P62987 AC007560.1-201ENST00000426912 237 ntBASIC1.61□□□□□ -2.15
UBA52P62987 SDCBPP1-201ENST00000440192 890 ntBASIC1.61□□□□□ -2.15
UBA52P62987 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.61□□□□□ -2.15
UBA52P62987 SNRPGP6-201ENST00000451124 220 ntBASIC1.61□□□□□ -2.15
UBA52P62987 FABP5P13-201ENST00000452144 328 ntBASIC1.61□□□□□ -2.15
UBA52P62987 snoU13.7-201ENST00000459220 104 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms