Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERVK_113P62684 AL356057.2-201ENST00000403318 432 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AL356432.1-201ENST00000405809 419 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 SNORA11.1-201ENST00000408133 129 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 RPL31P2-201ENST00000413849 377 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 CRYBB2P1-203ENST00000415709 538 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 MTCYBP8-201ENST00000422855 651 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 YME1L1P1-201ENST00000429435 297 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.7□□□□□ -1.66
HERVK_113P62684 AC108145.1-201ENST00000503770 153 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 IGKV2D-36-201ENST00000518643 226 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AC011979.2-201ENST00000527568 352 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AC022882.1-201ENST00000532142 501 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AC023050.3-201ENST00000541142 333 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.7□□□□□ -1.66
HERVK_113P62684 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
HERVK_113P62684 AC105224.1-201ENST00000587055 421 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.7□□□□□ -1.66
HERVK_113P62684 AC243960.4-201ENST00000600532 288 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 MIR432-201ENST00000606207 94 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 SNORA51-201ENST00000606420 132 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 AC093913.1-201ENST00000614178 329 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HERVK_113P62684 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERVK_113P62684 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HERVK_113P62684 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.7□□□□□ -1.66
HERVK_113P62684 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERVK_113P62684 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERVK_113P62684 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HERVK_113P62684 OR4G1P-203ENST00000641984 1631 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HERVK_113P62684 ZNF734P-201ENST00000419494 1534 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 Y_RNA.367-201ENST00000365544 101 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HERVK_113P62684 RNA5SP39-201ENST00000411245 120 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 AL365400.1-201ENST00000431854 640 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL353748.1-201ENST00000440753 474 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 DDX3P2-201ENST00000446138 111 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 RPS11P1-201ENST00000451072 473 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.69□□□□□ -1.66
HERVK_113P62684 AL356010.1-201ENST00000456364 102 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.69□□□□□ -1.66
HERVK_113P62684 SNORD121B-201ENST00000458838 81 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL163973.1-201ENST00000484753 577 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.69□□□□□ -1.66
HERVK_113P62684 HSPD1P15-201ENST00000505573 1122 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC025554.1-201ENST00000505641 188 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.69□□□□□ -1.66
HERVK_113P62684 AC022790.1-201ENST00000522872 204 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 SUB1P1-201ENST00000524415 382 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 PSMA2P1-201ENST00000526365 646 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.69□□□□□ -1.66
HERVK_113P62684 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HERVK_113P62684 AC128657.1-201ENST00000549459 145 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC078814.3-201ENST00000553036 491 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.69□□□□□ -1.66
HERVK_113P62684 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.69□□□□□ -1.66
HERVK_113P62684 AP001029.3-201ENST00000588063 596 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 VN1R80P-201ENST00000597126 338 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL121992.2-201ENST00000606262 256 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC069200.1-201ENST00000609511 323 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC135507.2-201ENST00000612443 309 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 AC040168.1-201ENST00000623594 991 ntBASIC4.69□□□□□ -1.66
HERVK_113P62684 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.69□□□□□ -1.66
HERVK_113P62684 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HERVK_113P62684 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HERVK_113P62684 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.69□□□□□ -1.66
HERVK_113P62684 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.68□□□□□ -1.66
HERVK_113P62684 SNORA63.1-201ENST00000362493 131 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 RNU4-48P-201ENST00000365559 182 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 RNU6-606P-201ENST00000384721 111 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 MIR30B-201ENST00000384850 88 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 MT-TC-201ENST00000387405 66 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AL136116.1-201ENST00000403591 381 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 FAT1P1-201ENST00000406588 507 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AC009161.1-201ENST00000417306 376 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AL353678.1-201ENST00000422735 741 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AL358472.1-201ENST00000431295 329 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.68□□□□□ -1.66
HERVK_113P62684 RPL36AP13-201ENST00000457490 317 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.68□□□□□ -1.66
HERVK_113P62684 BTF3P12-201ENST00000519620 469 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AL133271.1-201ENST00000538229 291 ntBASIC4.68□□□□□ -1.66
HERVK_113P62684 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.68□□□□□ -1.66
HERVK_113P62684 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.68□□□□□ -1.66
HERVK_113P62684 AC093027.1-201ENST00000546698 429 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms