Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN20P56880 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN20P56880 UBE2CP3-201ENST00000502715 450 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 DEFB108A-201ENST00000530110 222 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC009063.1-201ENST00000563342 702 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC005332.10-201ENST00000612725 619 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AL450472.3-201ENST00000615578 367 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 uc_338.12-201ENST00000616344 181 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC243312.2-201ENST00000623340 601 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AC019226.1-201ENST00000625666 515 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AC012442.3-202ENST00000636742 206 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 EXOC5P1-201ENST00000510543 1969 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 MFSD8-236ENST00000641509 4050 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN20P56880 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN20P56880 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN20P56880 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CLDN20P56880 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN20P56880 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN20P56880 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN20P56880 ZNF285B-201ENST00000561698 1767 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 SNORA31-201ENST00000362607 130 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RNU4-1-201ENST00000363925 141 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLDN20P56880 RNU6-278P-201ENST00000390945 109 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RNU6-192P-201ENST00000391253 100 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AL109755.1-201ENST00000401791 649 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RPS3AP24-201ENST00000407896 734 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RNU2-62P-201ENST00000410868 191 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 AC019097.1-201ENST00000424783 735 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 ISCA1P6-201ENST00000427740 390 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC079780.1-201ENST00000428259 207 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 GOT2P5-201ENST00000433995 546 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC090774.1-201ENST00000435925 246 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 ARPC3P1-201ENST00000437218 533 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC004866.2-201ENST00000438285 481 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC093156.1-201ENST00000440382 670 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN20P56880 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN20P56880 MTCO2P29-201ENST00000465212 189 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 TMED11P-201ENST00000479478 690 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RPL7P47-201ENST00000497299 556 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 AC010587.1-201ENST00000505809 469 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 MLLT10P2-201ENST00000506434 249 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN20P56880 SNORA67.7-201ENST00000516664 135 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC008489.1-201ENST00000524271 483 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AP003033.1-201ENST00000527244 415 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLDN20P56880 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN20P56880 AC245505.1-201ENST00000556398 224 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 EIF1P4-201ENST00000572664 335 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC080078.2-201ENST00000603766 501 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AL161729.4-201ENST00000604650 476 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC245389.1-201ENST00000605141 529 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AL603758.1-201ENST00000618654 241 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AL360181.4-201ENST00000621752 134 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 AC112200.1-201ENST00000625015 234 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 MIR4275-201ENST00000636486 87 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CLDN20P56880 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 DDX10P1-201ENST00000448545 1933 ntBASIC3.36□□□□□ -1.87
CLDN20P56880 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN20P56880 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CLDN20P56880 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN20P56880 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN20P56880 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN20P56880 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN20P56880 RNU5E-1-201ENST00000362477 120 ntBASIC3.35□□□□□ -1.87
CLDN20P56880 RNU5E-8P-201ENST00000363502 116 ntBASIC3.35□□□□□ -1.87
CLDN20P56880 RNU6-173P-201ENST00000364215 104 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms