Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU6-798P-201ENST00000516912 103 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
CLDN6P56747 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN6P56747 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN6P56747 AP000857.1-201ENST00000532151 543 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN6P56747 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN6P56747 RPL23AP78-201ENST00000599928 470 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 AL035411.2-201ENST00000604022 421 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 AC131902.3-201ENST00000611767 581 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 DUXAP10-204ENST00000612052 616 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 AL161629.2-201ENST00000615347 275 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLDN6P56747 AC010872.1-201ENST00000624225 675 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN6P56747 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN6P56747 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN6P56747 AC138915.1-201ENST00000565427 1685 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN6P56747 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CLDN6P56747 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN6P56747 AC012321.1-201ENST00000561622 1588 ntBASIC2.49□□□□□ -2.01
CLDN6P56747 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN6P56747 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN6P56747 RNA5SP99-201ENST00000364020 114 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 SNORD56.5-201ENST00000364281 72 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 RNU6-198P-201ENST00000384258 104 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 SNRPEP2-201ENST00000397592 279 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 MIR1290-201ENST00000408735 78 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN6P56747 FAM103A2P-201ENST00000444122 354 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 GSTA11P-201ENST00000452866 669 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 SUMO2P2-201ENST00000456482 255 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN6P56747 AC023424.2-201ENST00000493479 777 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.48□□□□□ -2.01
CLDN6P56747 RN7SKP24-201ENST00000515888 284 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN6P56747 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN6P56747 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN6P56747 MTCO3P13-201ENST00000577757 781 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN6P56747 AC010620.2-201ENST00000600135 313 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN6P56747 CTSLP2-204ENST00000629029 392 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 LRRC77P-213ENST00000637727 880 ntBASIC2.48□□□□□ -2.01
CLDN6P56747 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.48□□□□□ -2.01
CLDN6P56747 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN6P56747 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN6P56747 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CLDN6P56747 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN6P56747 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN6P56747 AC109315.1-201ENST00000584143 1347 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN6P56747 U8.9-201ENST00000365667 134 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 FO393413.1-201ENST00000402892 195 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 RAP1BP1-201ENST00000412709 553 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 RPLP0P7-201ENST00000416050 667 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN6P56747 AL139415.2-201ENST00000431968 163 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 MTND2P5-201ENST00000432656 1006 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN6P56747 HIGD1AP2-201ENST00000446367 280 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC005297.2-201ENST00000450430 606 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 OR6K1P-201ENST00000456766 971 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 RPL30P5-201ENST00000494923 336 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 RPL21P131-201ENST00000497298 483 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AP003049.1-201ENST00000529418 457 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 SETP2-201ENST00000553886 926 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC138915.2-201ENST00000569776 97 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 DUXAP11-201ENST00000603858 526 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AL583856.2-201ENST00000606298 543 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC011330.2-201ENST00000621680 635 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC004009.2-201ENST00000623016 728 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC079597.1-201ENST00000624306 508 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC068880.5-201ENST00000624331 290 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 AC087821.2-201ENST00000637086 450 ntBASIC2.47□□□□□ -2.01
CLDN6P56747 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN6P56747 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN6P56747 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN6P56747 Z99496.1-201ENST00000469424 1477 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN6P56747 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN6P56747 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN6P56747 AL356131.1-201ENST00000405826 414 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 RPS3AP24-201ENST00000407896 734 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 LUZP4P1-201ENST00000415420 344 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 RPL7P10-201ENST00000417407 739 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 NANOGP5-201ENST00000424456 877 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 DPRXP1-201ENST00000426312 460 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN6P56747 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN6P56747 AL591806.2-201ENST00000433122 173 ntBASIC2.46□□□□□ -2.02
CLDN6P56747 RPL26P6-201ENST00000440913 438 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms