Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-712P-201ENST00000410558 100 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 RNU2-42P-201ENST00000410697 113 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 ATG3P1-201ENST00000419507 911 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AL137014.1-201ENST00000420490 1226 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL12P48061 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 AL603825.1-201ENST00000438481 80 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 HMGB1P15-201ENST00000453854 435 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AL445669.2-201ENST00000454425 421 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 RPS27AP9-201ENST00000477681 438 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC069528.1-202ENST00000482888 637 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 RPL23AP49-201ENST00000492925 468 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL12P48061 AC096571.1-202ENST00000506634 735 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 RNU6-27P-201ENST00000516146 107 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC010376.1-201ENST00000522101 334 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 LRRC6P1-201ENST00000532188 885 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL12P48061 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL12P48061 MIR3912-201ENST00000577566 105 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC012669.1-201ENST00000603209 283 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC009269.6-201ENST00000621778 588 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC091925.2-201ENST00000625059 256 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 MKKS-204ENST00000639674 192 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 AC099063.3-201ENST00000642066 185 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL12P48061 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL12P48061 GDI2P1-201ENST00000429312 1336 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AP002907.1-201ENST00000606361 1430 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC244517.1-201ENST00000606030 2086 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL12P48061 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CXCL12P48061 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL12P48061 RNA5SP99-201ENST00000364020 114 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 RNU4-51P-201ENST00000364206 140 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 SNRPEP2-201ENST00000397592 279 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 RNA5SP129-201ENST00000410276 118 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC079780.1-201ENST00000428259 207 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC109583.1-201ENST00000432156 268 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC244505.4-201ENST00000434905 287 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 SSXP5-201ENST00000443473 287 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 RN7SL499P-201ENST00000481141 276 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 RPL9P6-201ENST00000492764 598 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AL024509.2-201ENST00000493462 493 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC010460.2-201ENST00000509054 677 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC004062.1-201ENST00000509926 645 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC087808.1-201ENST00000520501 361 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC026464.5-201ENST00000562497 722 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 MTND3P13-201ENST00000574391 343 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC069431.2-201ENST00000604149 1099 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 AL121652.1-201ENST00000608851 448 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC004696.1-201ENST00000614345 607 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AL136981.2-201ENST00000617319 734 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL12P48061 AC073348.1-201ENST00000623002 331 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 CYP3A51P-201ENST00000633513 256 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC084035.1-201ENST00000634543 607 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 AC110994.2-201ENST00000635481 492 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL12P48061 AL161431.1-201ENST00000618966 4205 ntBASIC2.43□□□□□ -2.02
CXCL12P48061 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL12P48061 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL12P48061 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL12P48061 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 AC092447.7-201ENST00000422212 1621 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms