Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HMGN2P23-201ENST00000456759 269 ntBASIC3.16□□□□□ -1.9
USP6P35125 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 AC005410.1-202ENST00000460347 485 ntBASIC3.16□□□□□ -1.9
USP6P35125 AC011979.1-201ENST00000472300 483 ntBASIC3.16□□□□□ -1.9
USP6P35125 SYPL1P1-201ENST00000473622 768 ntBASIC3.16□□□□□ -1.9
USP6P35125 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
USP6P35125 TRAV31-201ENST00000502780 342 ntBASIC3.16□□□□□ -1.9
USP6P35125 AC093767.1-201ENST00000504523 156 ntBASIC3.16□□□□□ -1.9
USP6P35125 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 RNU6-1225P-201ENST00000516336 65 ntBASIC3.16□□□□□ -1.9
USP6P35125 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
USP6P35125 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.16□□□□□ -1.9
USP6P35125 LARP7P2-201ENST00000575306 125 ntBASIC3.16□□□□□ -1.9
USP6P35125 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.16□□□□□ -1.9
USP6P35125 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
USP6P35125 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
USP6P35125 AC103710.3-201ENST00000608157 948 ntBASIC3.16□□□□□ -1.9
USP6P35125 AL136981.2-201ENST00000617319 734 ntBASIC3.16□□□□□ -1.9
USP6P35125 AL078595.3-201ENST00000623815 1166 ntBASIC3.16□□□□□ -1.9
USP6P35125 AC138649.5-201ENST00000637456 137 ntBASIC3.16□□□□□ -1.9
USP6P35125 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP6P35125 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
USP6P35125 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.16□□□□□ -1.9
USP6P35125 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
USP6P35125 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USP6P35125 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
USP6P35125 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.15□□□□□ -1.9
USP6P35125 AC107982.1-201ENST00000507171 1300 ntBASIC3.15□□□□□ -1.9
USP6P35125 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.15□□□□□ -1.91
USP6P35125 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.15□□□□□ -1.91
USP6P35125 RNU4-68P-201ENST00000364314 141 ntBASIC3.15□□□□□ -1.91
USP6P35125 SNORD82-201ENST00000365530 70 ntBASIC3.15□□□□□ -1.91
USP6P35125 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP6P35125 RNU6-629P-201ENST00000384061 103 ntBASIC3.15□□□□□ -1.91
USP6P35125 RNU6-413P-201ENST00000384115 107 ntBASIC3.15□□□□□ -1.91
USP6P35125 RNU6-339P-201ENST00000384310 107 ntBASIC3.15□□□□□ -1.91
USP6P35125 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
USP6P35125 AL450338.1-201ENST00000407987 512 ntBASIC3.15□□□□□ -1.91
USP6P35125 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.15□□□□□ -1.91
USP6P35125 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.15□□□□□ -1.91
USP6P35125 USP9YP24-201ENST00000434374 697 ntBASIC3.15□□□□□ -1.91
USP6P35125 EEF1A1P39-201ENST00000440791 250 ntBASIC3.15□□□□□ -1.91
USP6P35125 USP9YP17-201ENST00000444617 696 ntBASIC3.15□□□□□ -1.91
USP6P35125 VN1R10P-201ENST00000447106 875 ntBASIC3.15□□□□□ -1.91
USP6P35125 AC092757.1-201ENST00000467293 467 ntBASIC3.15□□□□□ -1.91
USP6P35125 RPL23AP70-201ENST00000483361 460 ntBASIC3.15□□□□□ -1.91
USP6P35125 AC010460.2-201ENST00000509054 677 ntBASIC3.15□□□□□ -1.91
USP6P35125 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.15□□□□□ -1.91
USP6P35125 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.15□□□□□ -1.91
USP6P35125 AC112673.1-201ENST00000513168 575 ntBASIC3.15□□□□□ -1.91
USP6P35125 MTCO1P30-201ENST00000515244 580 ntBASIC3.15□□□□□ -1.91
USP6P35125 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
USP6P35125 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.15□□□□□ -1.91
USP6P35125 AC023813.2-201ENST00000564321 469 ntBASIC3.15□□□□□ -1.91
USP6P35125 AL132657.2-201ENST00000564417 358 ntBASIC3.15□□□□□ -1.91
USP6P35125 AC090616.5-202ENST00000582111 297 ntBASIC3.15□□□□□ -1.91
USP6P35125 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.15□□□□□ -1.91
USP6P35125 AC106052.1-201ENST00000608029 497 ntBASIC3.15□□□□□ -1.91
USP6P35125 AC009974.1-201ENST00000608881 455 ntBASIC3.15□□□□□ -1.91
USP6P35125 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
USP6P35125 AL353997.5-201ENST00000618886 171 ntBASIC3.15□□□□□ -1.91
USP6P35125 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP6P35125 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP6P35125 XIAPP3-201ENST00000312918 795 ntBASIC3.14□□□□□ -1.91
USP6P35125 RNU6-216P-201ENST00000363282 104 ntBASIC3.14□□□□□ -1.91
USP6P35125 RNU5D-1-201ENST00000363299 116 ntBASIC3.14□□□□□ -1.91
USP6P35125 Y_RNA.164-201ENST00000363709 102 ntBASIC3.14□□□□□ -1.91
USP6P35125 RNA5SP167-201ENST00000365461 116 ntBASIC3.14□□□□□ -1.91
USP6P35125 SNORD116.1-201ENST00000365628 92 ntBASIC3.14□□□□□ -1.91
USP6P35125 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.14□□□□□ -1.91
USP6P35125 RNU6-1242P-201ENST00000391052 103 ntBASIC3.14□□□□□ -1.91
USP6P35125 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.14□□□□□ -1.91
USP6P35125 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.14□□□□□ -1.91
USP6P35125 ATG3P1-201ENST00000419507 911 ntBASIC3.14□□□□□ -1.91
USP6P35125 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 AC006548.1-201ENST00000427470 102 ntBASIC3.14□□□□□ -1.91
USP6P35125 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.14□□□□□ -1.91
USP6P35125 RPL23AP76-201ENST00000441860 458 ntBASIC3.14□□□□□ -1.91
USP6P35125 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 NPM1P49-201ENST00000448027 714 ntBASIC3.14□□□□□ -1.91
USP6P35125 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP6P35125 snoU13.3-201ENST00000459441 104 ntBASIC3.14□□□□□ -1.91
USP6P35125 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 AC114322.1-201ENST00000506771 926 ntBASIC3.14□□□□□ -1.91
USP6P35125 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.14□□□□□ -1.91
USP6P35125 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 SNRPGP18-201ENST00000553000 214 ntBASIC3.14□□□□□ -1.91
USP6P35125 AL132857.1-201ENST00000555180 708 ntBASIC3.14□□□□□ -1.91
USP6P35125 NRBF2P1-201ENST00000587407 859 ntBASIC3.14□□□□□ -1.91
USP6P35125 AL669831.4-202ENST00000590817 238 ntBASIC3.14□□□□□ -1.91
USP6P35125 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.14□□□□□ -1.91
USP6P35125 SNRPGP15-201ENST00000600149 222 ntBASIC3.14□□□□□ -1.91
USP6P35125 BNIP3P26-201ENST00000600827 554 ntBASIC3.14□□□□□ -1.91
USP6P35125 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.14□□□□□ -1.91
USP6P35125 AL355812.1-201ENST00000603215 216 ntBASIC3.14□□□□□ -1.91
USP6P35125 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms