Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MTCO1P39-201ENST00000426148 480 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 Z82205.1-201ENST00000428456 297 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC12P31275 AC092647.2-201ENST00000452998 253 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RPL30P15-201ENST00000457129 321 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RNU7-152P-201ENST00000458982 64 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RN7SL443P-201ENST00000464331 290 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC104472.2-201ENST00000469035 601 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC097484.1-201ENST00000471148 389 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RN7SL459P-201ENST00000481078 302 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 IGLV2-34-201ENST00000490007 283 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC008526.1-201ENST00000509149 338 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC104136.1-201ENST00000512969 394 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 SNORA31.3-201ENST00000516029 96 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC008033.2-201ENST00000542626 177 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC12P31275 AC074050.1-201ENST00000563247 211 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 AC012182.1-201ENST00000570133 895 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC12P31275 AC011626.1-201ENST00000604710 562 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 AL355365.1-201ENST00000616480 294 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 MIR6839-201ENST00000620425 113 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 MAPK10-320ENST00000641462 6696 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 AC104623.2-202ENST00000623477 4002 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 AC009812.4-201ENST00000569134 1805 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 ZNF519P1-201ENST00000449011 1626 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 RNU6-562P-201ENST00000362731 107 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 Y_RNA.422-201ENST00000384054 114 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 SNORA36C-201ENST00000384289 132 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 RNU6-601P-201ENST00000384540 107 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 SNORA66-201ENST00000384792 133 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 RNU6-817P-201ENST00000391083 104 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AL590704.1-201ENST00000402856 794 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC12P31275 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 RPL21P109-201ENST00000422213 475 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 SKA2P1-201ENST00000425592 390 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 SNAP23P1-201ENST00000433229 246 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 ATP5HP2-201ENST00000433885 485 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AF228730.2-201ENST00000438784 848 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 MTND1P17-201ENST00000448961 204 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 TPT1P12-201ENST00000448968 492 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 HMGB3P22-202ENST00000451823 572 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 FGF7P3-201ENST00000454645 303 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 Y_RNA.653-201ENST00000459091 95 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 RPL23AP2-201ENST00000471227 466 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AL163540.1-201ENST00000485382 386 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 RN7SL814P-201ENST00000487715 300 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AC008897.1-201ENST00000494006 347 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HOXC12P31275 RNU6-1069P-201ENST00000516612 133 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.51□□□□□ -1.69
HOXC12P31275 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC12P31275 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC12P31275 AC006270.2-201ENST00000578523 652 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC12P31275 CYP2C61P-201ENST00000604072 290 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AL161616.1-201ENST00000611867 286 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC12P31275 AL365440.1-201ENST00000436135 2167 ntBASIC4.51□□□□□ -1.69
HOXC12P31275 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXC12P31275 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC12P31275 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC12P31275 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC12P31275 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXC12P31275 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC12P31275 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC12P31275 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC12P31275 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC12P31275 RNA5SP502-201ENST00000362694 119 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 RNU6-1188P-201ENST00000363795 107 ntBASIC4.5□□□□□ -1.69
HOXC12P31275 RNU6-738P-201ENST00000384531 106 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms