Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA11P31270 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA11P31270 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
HOXA11P31270 AL672296.1-201ENST00000427780 2158 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HOXA11P31270 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 Y_RNA.256-201ENST00000364594 104 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA11P31270 MIR1277-201ENST00000408536 78 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 RNA5SP56-201ENST00000410277 118 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 RNU4-78P-201ENST00000410940 126 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AL133384.1-201ENST00000412744 351 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 MTCO3P12-201ENST00000416718 547 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 AL158156.1-201ENST00000422509 473 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AL445669.1-201ENST00000426743 755 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA11P31270 MTATP6P30-201ENST00000443540 664 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC112653.1-201ENST00000443851 386 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC007967.1-201ENST00000455422 1159 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC027673.1-201ENST00000456245 405 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC013267.1-201ENST00000458227 267 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 AC019235.1-201ENST00000503847 207 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 KCTD9P5-201ENST00000504141 1170 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 FAM92A1P2-202ENST00000504766 877 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 RNU6-150P-201ENST00000516237 95 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC104986.1-201ENST00000517978 436 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AP003467.2-201ENST00000520175 319 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXA11P31270 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 NCAPGP2-201ENST00000557911 754 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 MIR3913-1-201ENST00000577744 102 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC006504.3-201ENST00000586818 523 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA11P31270 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 AC025588.3-201ENST00000604182 274 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC104458.1-201ENST00000608243 463 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC092954.2-201ENST00000609103 430 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC072046.2-201ENST00000618366 268 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 AC092794.2-201ENST00000620933 563 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA11P31270 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA11P31270 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA11P31270 AC073073.2-201ENST00000609827 2578 ntBASIC3.82□□□□□ -1.8
HOXA11P31270 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA11P31270 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA11P31270 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA11P31270 FARSBP1-201ENST00000435808 1778 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA11P31270 AC004925.1-201ENST00000624256 2706 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HOXA11P31270 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA11P31270 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA11P31270 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA11P31270 MTND5P1-201ENST00000445440 1375 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 Y_RNA.9-201ENST00000362354 101 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RNU6-263P-201ENST00000363811 107 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RNU6-777P-201ENST00000364265 104 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA11P31270 RNU6-1103P-201ENST00000384150 107 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 Y_RNA.450-201ENST00000384198 113 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 MIR649-201ENST00000384843 97 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HOXA11P31270 TPMTP2-201ENST00000414372 726 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC007390.1-201ENST00000415722 356 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA11P31270 AC005300.1-201ENST00000428401 373 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA11P31270 MTND4P25-201ENST00000441039 533 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 GAPDHP17-201ENST00000449858 1001 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA11P31270 AC026410.2-201ENST00000460281 156 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RN7SL93P-201ENST00000463035 293 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC092757.1-201ENST00000467293 467 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RN7SL594P-201ENST00000470590 287 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RPL31P50-201ENST00000471002 296 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC093663.1-201ENST00000497190 394 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 HMGB1P29-201ENST00000505659 499 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA11P31270 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA11P31270 RNU6-314P-201ENST00000516574 104 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HOXA11P31270 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA11P31270 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA11P31270 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA11P31270 AC013828.2-201ENST00000532487 235 ntBASIC3.81□□□□□ -1.8
HOXA11P31270 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA11P31270 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms