Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNA5SP505-201ENST00000364748 108 ntBASIC4.13□□□□□ -1.75
CD40P25942 Y_RNA.431-201ENST00000384086 102 ntBASIC4.13□□□□□ -1.75
CD40P25942 Y_RNA.534-201ENST00000384599 112 ntBASIC4.13□□□□□ -1.75
CD40P25942 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CD40P25942 MIR450B-201ENST00000401182 78 ntBASIC4.13□□□□□ -1.75
CD40P25942 RPLP0P7-201ENST00000416050 667 ntBASIC4.13□□□□□ -1.75
CD40P25942 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 RPL21P109-201ENST00000422213 475 ntBASIC4.13□□□□□ -1.75
CD40P25942 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.13□□□□□ -1.75
CD40P25942 AL645608.4-201ENST00000423619 154 ntBASIC4.13□□□□□ -1.75
CD40P25942 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.13□□□□□ -1.75
CD40P25942 RPL21P66-201ENST00000426566 466 ntBASIC4.13□□□□□ -1.75
CD40P25942 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.13□□□□□ -1.75
CD40P25942 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.13□□□□□ -1.75
CD40P25942 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.13□□□□□ -1.75
CD40P25942 AC107399.1-201ENST00000451226 265 ntBASIC4.13□□□□□ -1.75
CD40P25942 RPL21P41-201ENST00000459863 264 ntBASIC4.13□□□□□ -1.75
CD40P25942 RPL7P5-201ENST00000471472 736 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC012181.1-201ENST00000479895 423 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC104136.1-201ENST00000512969 394 ntBASIC4.13□□□□□ -1.75
CD40P25942 APOOP4-201ENST00000513530 597 ntBASIC4.13□□□□□ -1.75
CD40P25942 SNORA14.1-201ENST00000516113 141 ntBASIC4.13□□□□□ -1.75
CD40P25942 RNU6-559P-201ENST00000516151 98 ntBASIC4.13□□□□□ -1.75
CD40P25942 SNORA31.8-201ENST00000516327 108 ntBASIC4.13□□□□□ -1.75
CD40P25942 SCARNA15.2-201ENST00000516409 127 ntBASIC4.13□□□□□ -1.75
CD40P25942 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 AL110118.1-201ENST00000553543 400 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.13□□□□□ -1.75
CD40P25942 MIR4790-201ENST00000577799 79 ntBASIC4.13□□□□□ -1.75
CD40P25942 RN7SL690P-201ENST00000582087 240 ntBASIC4.13□□□□□ -1.75
CD40P25942 MIR3941-201ENST00000582572 103 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC012119.1-201ENST00000603184 222 ntBASIC4.13□□□□□ -1.75
CD40P25942 APOOP1-201ENST00000604695 592 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC245389.1-201ENST00000605141 529 ntBASIC4.13□□□□□ -1.75
CD40P25942 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 MIR7703-201ENST00000620784 77 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC022418.1-201ENST00000624118 445 ntBASIC4.13□□□□□ -1.75
CD40P25942 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
CD40P25942 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 Z99571.1-201ENST00000636677 394 ntBASIC4.13□□□□□ -1.75
CD40P25942 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.13□□□□□ -1.75
CD40P25942 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CD40P25942 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.12□□□□□ -1.75
CD40P25942 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CD40P25942 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.12□□□□□ -1.75
CD40P25942 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CD40P25942 RNU6-600P-201ENST00000362524 99 ntBASIC4.12□□□□□ -1.75
CD40P25942 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 RNU6-45P-201ENST00000384471 107 ntBASIC4.12□□□□□ -1.75
CD40P25942 RNU1-82P-201ENST00000390851 165 ntBASIC4.12□□□□□ -1.75
CD40P25942 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 MIR548K-201ENST00000408406 116 ntBASIC4.12□□□□□ -1.75
CD40P25942 RN7SKP177-201ENST00000410567 355 ntBASIC4.12□□□□□ -1.75
CD40P25942 RN7SKP106-201ENST00000410832 272 ntBASIC4.12□□□□□ -1.75
CD40P25942 VN1R36P-201ENST00000414936 291 ntBASIC4.12□□□□□ -1.75
CD40P25942 RPL7P10-201ENST00000417407 739 ntBASIC4.12□□□□□ -1.75
CD40P25942 RPL27AP8-201ENST00000424277 446 ntBASIC4.12□□□□□ -1.75
CD40P25942 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 HSPD1P21-201ENST00000436541 245 ntBASIC4.12□□□□□ -1.75
CD40P25942 HSFY6P-201ENST00000445573 403 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC008264.1-201ENST00000447612 367 ntBASIC4.12□□□□□ -1.75
CD40P25942 Y_RNA.635-201ENST00000459041 101 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC087588.1-201ENST00000462203 316 ntBASIC4.12□□□□□ -1.75
CD40P25942 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
CD40P25942 RN7SL354P-201ENST00000469282 294 ntBASIC4.12□□□□□ -1.75
CD40P25942 VN1R17P-201ENST00000472048 1090 ntBASIC4.12□□□□□ -1.75
CD40P25942 RPL12P20-201ENST00000475538 479 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.12□□□□□ -1.75
CD40P25942 SNORA25.17-201ENST00000517184 124 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 HIGD1AP5-201ENST00000529959 259 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.12□□□□□ -1.75
CD40P25942 MTCO3P23-201ENST00000561363 289 ntBASIC4.12□□□□□ -1.75
CD40P25942 FRG2DP-202ENST00000566967 323 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.12□□□□□ -1.75
CD40P25942 MIR5692C1-201ENST00000585309 91 ntBASIC4.12□□□□□ -1.75
CD40P25942 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.12□□□□□ -1.75
CD40P25942 AC008638.3-201ENST00000603341 463 ntBASIC4.12□□□□□ -1.75
CD40P25942 AC098826.3-201ENST00000603823 466 ntBASIC4.12□□□□□ -1.75
CD40P25942 AL670379.10-201ENST00000604330 253 ntBASIC4.12□□□□□ -1.75
CD40P25942 AL670379.9-201ENST00000605428 253 ntBASIC4.12□□□□□ -1.75
CD40P25942 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms