Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
XPAP23025 RNU6-1029P-201ENST00000384109 107 ntBASIC4.37□□□□□ -1.71
XPAP23025 RNU6-903P-201ENST00000391270 109 ntBASIC4.37□□□□□ -1.71
XPAP23025 AL109755.1-201ENST00000401791 649 ntBASIC4.37□□□□□ -1.71
XPAP23025 Y_RNA.615-201ENST00000410769 117 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.37□□□□□ -1.71
XPAP23025 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.37□□□□□ -1.71
XPAP23025 BX323014.1-201ENST00000412876 237 ntBASIC4.37□□□□□ -1.71
XPAP23025 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.37□□□□□ -1.71
XPAP23025 AC244098.2-201ENST00000422068 99 ntBASIC4.37□□□□□ -1.71
XPAP23025 DUTP6-201ENST00000425573 462 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC008850.1-201ENST00000427546 362 ntBASIC4.37□□□□□ -1.71
XPAP23025 SRIP2-201ENST00000428470 166 ntBASIC4.37□□□□□ -1.71
XPAP23025 RPL21P112-201ENST00000434403 463 ntBASIC4.37□□□□□ -1.71
XPAP23025 RPL23AP52-201ENST00000439311 478 ntBASIC4.37□□□□□ -1.71
XPAP23025 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.37□□□□□ -1.71
XPAP23025 AL118520.1-201ENST00000450770 291 ntBASIC4.37□□□□□ -1.71
XPAP23025 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.37□□□□□ -1.71
XPAP23025 AC234775.1-201ENST00000454247 670 ntBASIC4.37□□□□□ -1.71
XPAP23025 RPL36AP13-201ENST00000457490 317 ntBASIC4.37□□□□□ -1.71
XPAP23025 AL162395.1-201ENST00000457882 422 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC010618.1-201ENST00000469924 477 ntBASIC4.37□□□□□ -1.71
XPAP23025 UQCRHP4-201ENST00000471686 272 ntBASIC4.37□□□□□ -1.71
XPAP23025 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.37□□□□□ -1.71
XPAP23025 RPL38P4-201ENST00000502376 214 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.37□□□□□ -1.71
XPAP23025 RNU6-1095P-201ENST00000516148 108 ntBASIC4.37□□□□□ -1.71
XPAP23025 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.37□□□□□ -1.71
XPAP23025 BTF3P12-201ENST00000519620 469 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC125611.2-201ENST00000551907 647 ntBASIC4.37□□□□□ -1.71
XPAP23025 RN7SL176P-201ENST00000580352 264 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC006254.3-201ENST00000603353 884 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC087045.1-201ENST00000605856 382 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC004696.1-201ENST00000614345 607 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC083809.1-201ENST00000615051 472 ntBASIC4.37□□□□□ -1.71
XPAP23025 AC009233.1-201ENST00000616477 371 ntBASIC4.37□□□□□ -1.71
XPAP23025 AL158196.1-201ENST00000616786 434 ntBASIC4.37□□□□□ -1.71
XPAP23025 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
XPAP23025 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
XPAP23025 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XPAP23025 AC004972.1-201ENST00000623934 2209 ntBASIC4.37□□□□□ -1.71
XPAP23025 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
XPAP23025 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
XPAP23025 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
XPAP23025 AL158163.1-201ENST00000603915 1649 ntBASIC4.36□□□□□ -1.71
XPAP23025 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.36□□□□□ -1.71
XPAP23025 MIR383-201ENST00000362257 73 ntBASIC4.36□□□□□ -1.71
XPAP23025 SNORA70.2-201ENST00000364506 135 ntBASIC4.36□□□□□ -1.71
XPAP23025 RNU6-335P-201ENST00000364563 113 ntBASIC4.36□□□□□ -1.71
XPAP23025 SNORA32.2-201ENST00000384049 122 ntBASIC4.36□□□□□ -1.71
XPAP23025 SNORD96B-201ENST00000386148 79 ntBASIC4.36□□□□□ -1.71
XPAP23025 SNORD37.1-201ENST00000390968 65 ntBASIC4.36□□□□□ -1.71
XPAP23025 AL583834.1-201ENST00000406943 343 ntBASIC4.36□□□□□ -1.71
XPAP23025 RPL21P24-201ENST00000413752 448 ntBASIC4.36□□□□□ -1.71
XPAP23025 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.36□□□□□ -1.71
XPAP23025 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.36□□□□□ -1.71
XPAP23025 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.36□□□□□ -1.71
XPAP23025 BEND7P1-201ENST00000422058 457 ntBASIC4.36□□□□□ -1.71
XPAP23025 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.36□□□□□ -1.71
XPAP23025 GAPDHP27-201ENST00000447427 1020 ntBASIC4.36□□□□□ -1.71
XPAP23025 RNU7-182P-201ENST00000459009 62 ntBASIC4.36□□□□□ -1.71
XPAP23025 AC007537.2-201ENST00000472093 511 ntBASIC4.36□□□□□ -1.71
XPAP23025 RN7SKP122-201ENST00000515923 296 ntBASIC4.36□□□□□ -1.71
XPAP23025 RNU2-58P-201ENST00000516403 183 ntBASIC4.36□□□□□ -1.71
XPAP23025 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.36□□□□□ -1.71
XPAP23025 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.36□□□□□ -1.71
XPAP23025 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.36□□□□□ -1.71
XPAP23025 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.36□□□□□ -1.71
XPAP23025 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.36□□□□□ -1.71
XPAP23025 RPL7P50-201ENST00000600588 727 ntBASIC4.36□□□□□ -1.71
XPAP23025 RNU4-89P-201ENST00000607443 133 ntBASIC4.36□□□□□ -1.71
XPAP23025 AC135507.2-201ENST00000612443 309 ntBASIC4.36□□□□□ -1.71
XPAP23025 MIR6716-201ENST00000613413 80 ntBASIC4.36□□□□□ -1.71
XPAP23025 AC010133.1-201ENST00000615809 842 ntBASIC4.36□□□□□ -1.71
XPAP23025 AC009248.2-201ENST00000619826 254 ntBASIC4.36□□□□□ -1.71
XPAP23025 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.36□□□□□ -1.71
XPAP23025 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.36□□□□□ -1.71
XPAP23025 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
XPAP23025 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
XPAP23025 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
XPAP23025 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
XPAP23025 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
XPAP23025 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
XPAP23025 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.35□□□□□ -1.71
XPAP23025 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.35□□□□□ -1.71
XPAP23025 SNORA31-201ENST00000362607 130 ntBASIC4.35□□□□□ -1.71
XPAP23025 RNU6-552P-201ENST00000362869 119 ntBASIC4.35□□□□□ -1.71
XPAP23025 RNU6-1155P-201ENST00000363554 107 ntBASIC4.35□□□□□ -1.71
XPAP23025 RNA5SP28-201ENST00000363841 119 ntBASIC4.35□□□□□ -1.71
XPAP23025 RNA5SP366-201ENST00000365454 123 ntBASIC4.35□□□□□ -1.71
XPAP23025 RNA5SP151-201ENST00000365632 117 ntBASIC4.35□□□□□ -1.71
XPAP23025 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.35□□□□□ -1.71
XPAP23025 SNORA74C-2-201ENST00000411179 201 ntBASIC4.35□□□□□ -1.71
XPAP23025 AC007390.1-201ENST00000415722 356 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms