Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 BNIP3P33-201ENST00000598912 569 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC008277.2-201ENST00000605196 797 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 HMGN2P28-201ENST00000606102 262 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC093838.1-201ENST00000613014 469 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 OR1S2-201ENST00000302592 978 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 RNU6-223P-201ENST00000362830 107 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 U8.11-201ENST00000384699 133 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 U8.12-201ENST00000384701 133 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC007283.2-201ENST00000424739 197 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 MTCO2P19-201ENST00000427513 598 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL139415.2-201ENST00000431968 163 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 NANOGP10-201ENST00000453325 895 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 MTND2P24-201ENST00000453434 806 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC007967.1-201ENST00000455422 1159 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 U8.18-201ENST00000459285 133 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 MTCO3P38-201ENST00000468910 766 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL121769.1-201ENST00000469473 401 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC079382.1-201ENST00000493346 557 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC009646.1-201ENST00000510455 318 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC126177.3-201ENST00000551839 688 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 SUB1P2-201ENST00000556401 297 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL133241.1-201ENST00000556832 487 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 HMGB1P33-201ENST00000563485 527 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 OR4K8P-201ENST00000578842 1048 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 MIR5187-201ENST00000583479 76 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL391646.1-201ENST00000603860 190 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC017083.3-201ENST00000609955 700 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL603758.1-201ENST00000618654 241 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 AC007656.2-201ENST00000624902 4547 ntBASIC3.29□□□□□ -1.88
HLA-DOBP13765 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DOBP13765 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DOBP13765 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL365440.1-201ENST00000436135 2167 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 RNU6-1097P-201ENST00000363586 107 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 RNU6-169P-201ENST00000365336 107 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 RNU6-108P-201ENST00000365558 107 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 Y_RNA.450-201ENST00000384198 113 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 SNORD115-47-201ENST00000391226 86 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL138878.1-201ENST00000405131 347 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC244098.2-201ENST00000422068 99 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC000111.3-201ENST00000433478 193 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 RBMX2P4-201ENST00000441256 376 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
HLA-DOBP13765 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DOBP13765 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
HLA-DOBP13765 RPS3AP50-201ENST00000487064 803 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms