Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC093591.1-201ENST00000491435 481 ntBASIC2.44□□□□□ -2.02
CFTRP13569 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.44□□□□□ -2.02
CFTRP13569 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.44□□□□□ -2.02
CFTRP13569 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.44□□□□□ -2.02
CFTRP13569 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-6P-201ENST00000606623 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 MIR6078-201ENST00000611069 100 ntBASIC2.44□□□□□ -2.02
CFTRP13569 AC090617.7-201ENST00000623952 126 ntBASIC2.44□□□□□ -2.02
CFTRP13569 MTND4P34-201ENST00000572715 1371 ntBASIC2.44□□□□□ -2.02
CFTRP13569 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.44□□□□□ -2.02
CFTRP13569 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.44□□□□□ -2.02
CFTRP13569 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CFTRP13569 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CFTRP13569 SSXP9-201ENST00000417503 292 ntBASIC2.43□□□□□ -2.02
CFTRP13569 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.43□□□□□ -2.02
CFTRP13569 CALM1P2-201ENST00000452941 448 ntBASIC2.43□□□□□ -2.02
CFTRP13569 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.43□□□□□ -2.02
CFTRP13569 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.43□□□□□ -2.02
CFTRP13569 RNA5SP220-201ENST00000516298 104 ntBASIC2.43□□□□□ -2.02
CFTRP13569 RN7SKP49-201ENST00000516675 260 ntBASIC2.43□□□□□ -2.02
CFTRP13569 TRAV28-201ENST00000557548 323 ntBASIC2.43□□□□□ -2.02
CFTRP13569 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.43□□□□□ -2.02
CFTRP13569 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.43□□□□□ -2.02
CFTRP13569 AC008687.2-201ENST00000597865 520 ntBASIC2.43□□□□□ -2.02
CFTRP13569 BNIP3P4-201ENST00000604946 565 ntBASIC2.43□□□□□ -2.02
CFTRP13569 AC080078.3-201ENST00000605407 463 ntBASIC2.43□□□□□ -2.02
CFTRP13569 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.43□□□□□ -2.02
CFTRP13569 Z85994.2-201ENST00000434327 452 ntBASIC2.42□□□□□ -2.02
CFTRP13569 MED6P1-201ENST00000439659 713 ntBASIC2.42□□□□□ -2.02
CFTRP13569 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.42□□□□□ -2.02
CFTRP13569 RNU4-60P-201ENST00000517239 135 ntBASIC2.42□□□□□ -2.02
CFTRP13569 AC016957.1-201ENST00000534895 309 ntBASIC2.42□□□□□ -2.02
CFTRP13569 MIR3690-201ENST00000580266 75 ntBASIC2.42□□□□□ -2.02
CFTRP13569 AL713998.2-201ENST00000604538 1198 ntBASIC2.42□□□□□ -2.02
CFTRP13569 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CFTRP13569 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.42□□□□□ -2.02
CFTRP13569 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CFTRP13569 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.41□□□□□ -2.02
CFTRP13569 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.41□□□□□ -2.02
CFTRP13569 RNU6-56P-201ENST00000516986 93 ntBASIC2.41□□□□□ -2.02
CFTRP13569 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CFTRP13569 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.41□□□□□ -2.02
CFTRP13569 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.02
CFTRP13569 DEFB109C-201ENST00000382575 264 ntBASIC2.4□□□□□ -2.02
CFTRP13569 DEFB109B-201ENST00000382656 264 ntBASIC2.4□□□□□ -2.02
CFTRP13569 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.4□□□□□ -2.02
CFTRP13569 CALM1P1-201ENST00000442082 433 ntBASIC2.4□□□□□ -2.02
CFTRP13569 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.4□□□□□ -2.02
CFTRP13569 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.4□□□□□ -2.02
CFTRP13569 MTCYBP37-201ENST00000510642 1133 ntBASIC2.4□□□□□ -2.02
CFTRP13569 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.02
CFTRP13569 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.4□□□□□ -2.02
CFTRP13569 MTCO3P24-201ENST00000572729 782 ntBASIC2.4□□□□□ -2.02
CFTRP13569 uc_338.9-201ENST00000617424 182 ntBASIC2.4□□□□□ -2.02
CFTRP13569 ZNF33CP-201ENST00000432492 2030 ntBASIC2.4□□□□□ -2.03
CFTRP13569 RNU1-101P-201ENST00000391171 127 ntBASIC2.39□□□□□ -2.03
CFTRP13569 SNRPEP2-201ENST00000397592 279 ntBASIC2.39□□□□□ -2.03
CFTRP13569 Z85995.1-201ENST00000415547 335 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AL357078.2-201ENST00000416486 427 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.39□□□□□ -2.03
CFTRP13569 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.39□□□□□ -2.03
CFTRP13569 HMGN2P16-201ENST00000456802 261 ntBASIC2.39□□□□□ -2.03
CFTRP13569 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.39□□□□□ -2.03
CFTRP13569 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.39□□□□□ -2.03
CFTRP13569 AC239860.2-201ENST00000525886 270 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.39□□□□□ -2.03
CFTRP13569 AL355816.1-201ENST00000607951 118 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AL158801.5-201ENST00000623123 465 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.39□□□□□ -2.03
CFTRP13569 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.39□□□□□ -2.03
CFTRP13569 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CFTRP13569 MIR607-201ENST00000385241 96 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.39□□□□□ -2.03
CFTRP13569 SSXP4-201ENST00000451349 245 ntBASIC2.39□□□□□ -2.03
CFTRP13569 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
CFTRP13569 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.39□□□□□ -2.03
CFTRP13569 OR6C73P-201ENST00000546432 358 ntBASIC2.39□□□□□ -2.03
CFTRP13569 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CFTRP13569 AL137100.2-201ENST00000555786 315 ntBASIC2.39□□□□□ -2.03
CFTRP13569 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
CFTRP13569 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
CFTRP13569 AC139769.3-201ENST00000618383 175 ntBASIC2.39□□□□□ -2.03
CFTRP13569 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CFTRP13569 RNF6P1-201ENST00000444889 1784 ntBASIC2.38□□□□□ -2.03
CFTRP13569 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.38□□□□□ -2.03
CFTRP13569 MTND5P3-201ENST00000438536 1800 ntBASIC2.38□□□□□ -2.03
CFTRP13569 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CFTRP13569 RNU6-1080P-201ENST00000383982 107 ntBASIC2.38□□□□□ -2.03
CFTRP13569 MIR320A-201ENST00000385302 82 ntBASIC2.38□□□□□ -2.03
CFTRP13569 SNORA40.6-201ENST00000391153 128 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AC073264.1-201ENST00000411508 416 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.38□□□□□ -2.03
CFTRP13569 AC093716.1-201ENST00000435923 377 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AP002345.1-201ENST00000456493 928 ntBASIC2.38□□□□□ -2.03
CFTRP13569 RPS29P20-201ENST00000489592 171 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AP005435.4-201ENST00000529514 284 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AC025423.2-201ENST00000537570 439 ntBASIC2.38□□□□□ -2.03
CFTRP13569 AC023813.2-201ENST00000564321 469 ntBASIC2.38□□□□□ -2.03
CFTRP13569 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CFTRP13569 AL078603.1-201ENST00000603824 313 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms