Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.68□□□□□ -2.14
FREM3P0C091 MTCYBP34-201ENST00000439552 670 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 RPL23AP58-201ENST00000440453 469 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 HSFY3P-201ENST00000444242 1191 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.68□□□□□ -2.14
FREM3P0C091 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.68□□□□□ -2.14
FREM3P0C091 AC092685.1-201ENST00000447960 1243 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 MLLT10P2-201ENST00000506434 249 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
FREM3P0C091 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.68□□□□□ -2.14
FREM3P0C091 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
FREM3P0C091 MIR8070-201ENST00000616510 88 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 AC024595.1-201ENST00000623088 387 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 AL356118.1-201ENST00000635272 1078 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
FREM3P0C091 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
FREM3P0C091 MTND4P8-201ENST00000514997 1362 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 DSTNP4-201ENST00000399472 474 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 RNU2-17P-201ENST00000410290 190 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC092745.2-202ENST00000411880 369 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
FREM3P0C091 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.67□□□□□ -2.14
FREM3P0C091 HMGB1P46-201ENST00000520062 610 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.67□□□□□ -2.14
FREM3P0C091 SETP2-201ENST00000553886 926 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
FREM3P0C091 AC104581.2-201ENST00000572227 430 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 U73023.1-201ENST00000603134 700 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC090116.1-201ENST00000615679 446 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC104307.1-201ENST00000616142 196 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
FREM3P0C091 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.67□□□□□ -2.14
FREM3P0C091 RNU1-17P-201ENST00000363022 152 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
FREM3P0C091 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 Z85994.2-201ENST00000434327 452 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC068135.1-201ENST00000446164 246 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 RN7SKP40-201ENST00000517211 242 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.67□□□□□ -2.14
FREM3P0C091 XIAPP1-201ENST00000603162 600 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC013444.2-201ENST00000603317 787 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AC055876.5-201ENST00000605667 259 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 LINC00216-201ENST00000623548 1126 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 AL109659.3-201ENST00000624985 950 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.67□□□□□ -2.14
FREM3P0C091 AC026241.1-201ENST00000517873 2142 ntBASIC1.67□□□□□ -2.14
FREM3P0C091 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 MIR7-1-201ENST00000384871 110 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.66□□□□□ -2.14
FREM3P0C091 RPL7P37-201ENST00000425095 738 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 SUMO1P1-201ENST00000497904 306 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.66□□□□□ -2.14
FREM3P0C091 IGLV3-17-201ENST00000519099 244 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC106028.5-201ENST00000610332 395 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC107905.1-201ENST00000616204 426 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AC002064.3-201ENST00000623448 346 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FREM3P0C091 AP005901.5-201ENST00000545779 1796 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 HSPE1P11-201ENST00000339579 310 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 MIR627-201ENST00000384979 97 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 ANAPC10P1-201ENST00000395991 556 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AL136372.1-201ENST00000403060 228 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 MTND1P23-201ENST00000416931 372 ntBASIC1.66□□□□□ -2.14
FREM3P0C091 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.66□□□□□ -2.14
FREM3P0C091 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.66□□□□□ -2.14
FREM3P0C091 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.66□□□□□ -2.14
FREM3P0C091 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms