Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC022882.1-201ENST00000532142 501 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AL157687.1-201ENST00000554853 619 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AC009101.1-201ENST00000568135 242 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.56□□□□□ -1.68
SNRPA1P09661 RPL23AP92-201ENST00000603609 255 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC007363.1-201ENST00000604736 620 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC139792.3-201ENST00000623525 224 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNRPA1P09661 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNRPA1P09661 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AL136964.1-201ENST00000622038 2990 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 MAPK10-253ENST00000641010 4072 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNRPA1P09661 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC092447.10-201ENST00000620607 1652 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 RNU5E-1-201ENST00000362477 120 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 Y_RNA.38-201ENST00000362617 102 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 SNORD82-201ENST00000365530 70 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 Y_RNA.573-201ENST00000384763 105 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 RPL23AP32-201ENST00000395315 459 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 RNU2-8P-201ENST00000410727 190 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.55□□□□□ -1.68
SNRPA1P09661 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC019097.1-201ENST00000424783 735 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 PSMA6P3-201ENST00000428242 164 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC005019.1-201ENST00000436455 431 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 BX510359.1-201ENST00000456973 237 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 HMGB1P21-201ENST00000502313 581 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 TXNP6-201ENST00000510190 310 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC016065.2-201ENST00000514530 444 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 Y_RNA.693-201ENST00000516641 110 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 SNORA20.3-201ENST00000516880 132 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 SUB1P2-201ENST00000556401 297 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC025678.1-201ENST00000567861 338 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AC067852.4-201ENST00000590314 478 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.55□□□□□ -1.68
SNRPA1P09661 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 BX664608.1-201ENST00000610519 487 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AL020991.1-201ENST00000612314 373 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 Y_RNA.804-201ENST00000615262 101 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNRPA1P09661 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.55□□□□□ -1.68
SNRPA1P09661 MIR1321-201ENST00000637766 79 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 AL732372.2-225ENST00000642124 456 ntBASIC4.55□□□□□ -1.68
SNRPA1P09661 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.55□□□□□ -1.68
SNRPA1P09661 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNRPA1P09661 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNRPA1P09661 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNRPA1P09661 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.54□□□□□ -1.68
SNRPA1P09661 AC097714.1-201ENST00000511272 1647 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SNRPA1P09661 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.54□□□□□ -1.68
SNRPA1P09661 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNRPA1P09661 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SNRPA1P09661 MT-TL1-201ENST00000386347 75 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNRPA1P09661 AMD1P2-201ENST00000412936 992 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 MTND3P23-201ENST00000431980 347 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 USP12PX-201ENST00000432383 1057 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.54□□□□□ -1.68
SNRPA1P09661 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.54□□□□□ -1.68
SNRPA1P09661 snoU13.24-201ENST00000458998 104 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 RNU2-27P-201ENST00000516185 142 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 RNU6-358P-201ENST00000516564 75 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 Vault.3-201ENST00000516676 95 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 AC092470.1-201ENST00000546187 132 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.54□□□□□ -1.68
SNRPA1P09661 AC099489.2-201ENST00000574976 260 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 MIR3118-1-201ENST00000581787 76 ntBASIC4.54□□□□□ -1.68
SNRPA1P09661 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.54□□□□□ -1.68
SNRPA1P09661 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.54□□□□□ -1.68
SNRPA1P09661 AC012507.3-201ENST00000603556 477 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms