Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 AC008885.2-201ENST00000509506 930 ntBASIC0.88□□□□□ -2.27
APOBP04114 SNORA31.15-201ENST00000516771 132 ntBASIC0.88□□□□□ -2.27
APOBP04114 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.88□□□□□ -2.27
APOBP04114 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
APOBP04114 MIR758-201ENST00000390227 88 ntBASIC0.87□□□□□ -2.27
APOBP04114 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.87□□□□□ -2.27
APOBP04114 RPS15AP1-201ENST00000457423 391 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC019176.1-201ENST00000518519 225 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC087854.1-201ENST00000519706 414 ntBASIC0.87□□□□□ -2.27
APOBP04114 AL121821.2-201ENST00000556081 394 ntBASIC0.87□□□□□ -2.27
APOBP04114 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
APOBP04114 RNU6-603P-201ENST00000411403 107 ntBASIC0.87□□□□□ -2.27
APOBP04114 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC0.87□□□□□ -2.27
APOBP04114 RPL35AP22-201ENST00000436855 335 ntBASIC0.87□□□□□ -2.27
APOBP04114 TPRKBP1-201ENST00000456243 481 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.87□□□□□ -2.27
APOBP04114 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
APOBP04114 AP001029.3-201ENST00000588063 596 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC011890.2-201ENST00000613393 294 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC007256.1-201ENST00000392253 2765 ntBASIC0.87□□□□□ -2.27
APOBP04114 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
APOBP04114 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC0.87□□□□□ -2.27
APOBP04114 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.87□□□□□ -2.27
APOBP04114 AL445493.3-201ENST00000619568 477 ntBASIC0.87□□□□□ -2.27
APOBP04114 AL158801.5-201ENST00000623123 465 ntBASIC0.87□□□□□ -2.27
APOBP04114 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
APOBP04114 RNU6-882P-201ENST00000391025 103 ntBASIC0.86□□□□□ -2.27
APOBP04114 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
APOBP04114 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 AC108059.3-201ENST00000456388 214 ntBASIC0.86□□□□□ -2.27
APOBP04114 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 RNA5SP82-201ENST00000516707 92 ntBASIC0.86□□□□□ -2.27
APOBP04114 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.86□□□□□ -2.27
APOBP04114 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.86□□□□□ -2.27
APOBP04114 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.86□□□□□ -2.27
APOBP04114 BLOC1S2P1-201ENST00000428431 301 ntBASIC0.86□□□□□ -2.27
APOBP04114 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.86□□□□□ -2.27
APOBP04114 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 AC025755.1-201ENST00000521306 278 ntBASIC0.86□□□□□ -2.27
APOBP04114 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.86□□□□□ -2.27
APOBP04114 AC112191.3-201ENST00000604371 277 ntBASIC0.86□□□□□ -2.27
APOBP04114 AC011477.1-204ENST00000623416 1325 ntBASIC0.86□□□□□ -2.27
APOBP04114 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.86□□□□□ -2.27
APOBP04114 OR10R1P-201ENST00000441524 1141 ntBASIC0.86□□□□□ -2.27
APOBP04114 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
APOBP04114 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.86□□□□□ -2.27
APOBP04114 RNA5SP139-201ENST00000364340 117 ntBASIC0.86□□□□□ -2.27
APOBP04114 Y_RNA.251-201ENST00000364551 99 ntBASIC0.86□□□□□ -2.27
APOBP04114 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.86□□□□□ -2.27
APOBP04114 AC121758.2-201ENST00000553271 193 ntBASIC0.86□□□□□ -2.27
APOBP04114 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
APOBP04114 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.86□□□□□ -2.27
APOBP04114 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.86□□□□□ -2.27
APOBP04114 SGO1P2-201ENST00000429458 1589 ntBASIC0.86□□□□□ -2.27
APOBP04114 MCTS2P-201ENST00000394552 546 ntBASIC0.85□□□□□ -2.27
APOBP04114 Z85995.1-201ENST00000415547 335 ntBASIC0.85□□□□□ -2.27
APOBP04114 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.85□□□□□ -2.27
APOBP04114 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
APOBP04114 MTCO1P48-201ENST00000448024 1096 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC022431.1-201ENST00000450941 438 ntBASIC0.85□□□□□ -2.27
APOBP04114 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.85□□□□□ -2.27
APOBP04114 AC106901.1-201ENST00000425086 698 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.85□□□□□ -2.27
APOBP04114 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.85□□□□□ -2.27
APOBP04114 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.85□□□□□ -2.27
APOBP04114 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.85□□□□□ -2.27
APOBP04114 SUB1P4-201ENST00000566062 339 ntBASIC0.85□□□□□ -2.27
APOBP04114 uc_338.20-201ENST00000621563 178 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC025048.6-202ENST00000627667 438 ntBASIC0.85□□□□□ -2.27
APOBP04114 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
APOBP04114 AP004607.1-201ENST00000524456 203 ntBASIC0.85□□□□□ -2.27
APOBP04114 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.85□□□□□ -2.27
APOBP04114 AC023825.1-201ENST00000566704 1030 ntBASIC0.85□□□□□ -2.27
APOBP04114 SNHG22-203ENST00000617833 660 ntBASIC0.85□□□□□ -2.27
APOBP04114 DUXAP9-208ENST00000622815 614 ntBASIC0.85□□□□□ -2.27
APOBP04114 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.84□□□□□ -2.27
APOBP04114 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.84□□□□□ -2.27
APOBP04114 ZNF192P1-203ENST00000565888 810 ntBASIC0.84□□□□□ -2.27
APOBP04114 RPL23AP88-201ENST00000605759 454 ntBASIC0.84□□□□□ -2.27
APOBP04114 C2orf27A-204ENST00000623058 969 ntBASIC0.84□□□□□ -2.27
APOBP04114 DDX43P2-201ENST00000604753 1354 ntBASIC0.84□□□□□ -2.27
APOBP04114 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
APOBP04114 THAP5P1-201ENST00000439089 262 ntBASIC0.84□□□□□ -2.27
APOBP04114 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
APOBP04114 AC008121.3-201ENST00000618726 433 ntBASIC0.84□□□□□ -2.27
APOBP04114 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
APOBP04114 Y_RNA.68-201ENST00000362881 102 ntBASIC0.84□□□□□ -2.28
APOBP04114 MIR1304-201ENST00000408243 91 ntBASIC0.84□□□□□ -2.28
APOBP04114 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.84□□□□□ -2.28
APOBP04114 FABP5P5-201ENST00000515537 406 ntBASIC0.84□□□□□ -2.28
APOBP04114 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.84□□□□□ -2.28
APOBP04114 MIR4716-201ENST00000579628 84 ntBASIC0.84□□□□□ -2.28
APOBP04114 AC011712.1-201ENST00000588959 234 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms