Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Y_RNA.257-201ENST00000364596 102 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 Y_RNA.288-201ENST00000364854 92 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PDGFAP04085 SNORA67-201ENST00000384423 137 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 MIR551A-201ENST00000385042 96 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 DYNLT3P2-201ENST00000442517 295 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 AC073587.1-201ENST00000447093 876 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 AL049874.1-201ENST00000489560 388 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 SNRPCP2-201ENST00000504370 475 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 ENPP7P11-201ENST00000505915 627 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 MLLT10P2-201ENST00000506434 249 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 RNA5SP471-201ENST00000516971 106 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 RNU6-388P-201ENST00000517012 105 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 RNU6-389P-201ENST00000517048 105 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 CBX3P8-201ENST00000532412 525 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.07□□□□□ -1.6
PDGFAP04085 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFAP04085 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.07□□□□□ -1.6
PDGFAP04085 MIR4311-201ENST00000580794 100 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 MIR5188-201ENST00000583467 113 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 AC098826.3-201ENST00000603823 466 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 AC109583.2-201ENST00000617367 129 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PDGFAP04085 AP002799.1-201ENST00000623552 423 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFAP04085 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PDGFAP04085 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.07□□□□□ -1.6
PDGFAP04085 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDGFAP04085 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PDGFAP04085 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.07□□□□□ -1.6
PDGFAP04085 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
PDGFAP04085 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.06□□□□□ -1.6
PDGFAP04085 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 AC022893.2-201ENST00000564832 3296 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 Y_RNA.33-201ENST00000362591 102 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RNU6-1167P-201ENST00000363227 94 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RNU4-42P-201ENST00000364738 142 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 Y_RNA.526-201ENST00000384572 110 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 AL513475.1-201ENST00000406602 315 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 AC073910.1-201ENST00000445047 438 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 RNU6-1037P-201ENST00000459571 107 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC022493.1-201ENST00000492984 337 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 RNU1-86P-201ENST00000516108 154 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RNU1-107P-201ENST00000516617 154 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC040926.1-201ENST00000530195 238 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 TRAV37-201ENST00000553906 342 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 TRAV32-201ENST00000553993 340 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RPL10P14-201ENST00000565265 298 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.06□□□□□ -1.6
PDGFAP04085 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFAP04085 FAM60BP-201ENST00000578364 658 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 MIR6133-201ENST00000617057 108 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 MIR6810-201ENST00000622701 70 ntBASIC5.06□□□□□ -1.6
PDGFAP04085 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.06□□□□□ -1.6
PDGFAP04085 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
PDGFAP04085 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFAP04085 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFAP04085 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDGFAP04085 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PDGFAP04085 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFAP04085 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFAP04085 Y_RNA.48-201ENST00000362710 103 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 Y_RNA.396-201ENST00000383949 103 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 MIR625-201ENST00000385047 85 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 MIR514A1-201ENST00000385133 98 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDGFAP04085 U3.36-201ENST00000408418 213 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFAP04085 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFAP04085 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFAP04085 AC079780.1-201ENST00000428259 207 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 AC006946.1-201ENST00000429106 328 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 RPL21P2-201ENST00000440049 481 ntBASIC5.05□□□□□ -1.6
PDGFAP04085 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFAP04085 AL591623.2-201ENST00000449978 222 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms