Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.75□□□□□ -2.13
TNFP01375 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.75□□□□□ -2.13
TNFP01375 BNIP3P7-201ENST00000605641 516 ntBASIC1.75□□□□□ -2.13
TNFP01375 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
TNFP01375 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
TNFP01375 AC009090.3-201ENST00000616553 565 ntBASIC1.75□□□□□ -2.13
TNFP01375 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.75□□□□□ -2.13
TNFP01375 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TNFP01375 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
TNFP01375 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFP01375 Z98749.2-208ENST00000381646 500 ntBASIC1.74□□□□□ -2.13
TNFP01375 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TNFP01375 RNU6-185P-201ENST00000384421 107 ntBASIC1.74□□□□□ -2.13
TNFP01375 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
TNFP01375 RNU4-78P-201ENST00000410940 126 ntBASIC1.74□□□□□ -2.13
TNFP01375 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.74□□□□□ -2.13
TNFP01375 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFP01375 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 MTCYBP12-201ENST00000440559 1134 ntBASIC1.74□□□□□ -2.13
TNFP01375 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.74□□□□□ -2.13
TNFP01375 RNF2P1-201ENST00000442955 1010 ntBASIC1.74□□□□□ -2.13
TNFP01375 AC133963.2-201ENST00000513686 578 ntBASIC1.74□□□□□ -2.13
TNFP01375 RNU6-1004P-201ENST00000516584 111 ntBASIC1.74□□□□□ -2.13
TNFP01375 TRAV11-201ENST00000539512 339 ntBASIC1.74□□□□□ -2.13
TNFP01375 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.74□□□□□ -2.13
TNFP01375 AC126177.3-201ENST00000551839 688 ntBASIC1.74□□□□□ -2.13
TNFP01375 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
TNFP01375 MIR4448-201ENST00000584360 86 ntBASIC1.74□□□□□ -2.13
TNFP01375 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 APOOP1-201ENST00000604695 592 ntBASIC1.74□□□□□ -2.13
TNFP01375 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 AC098657.3-201ENST00000620434 263 ntBASIC1.74□□□□□ -2.13
TNFP01375 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.74□□□□□ -2.13
TNFP01375 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TNFP01375 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFP01375 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
TNFP01375 SNORA38-201ENST00000363946 132 ntBASIC1.73□□□□□ -2.13
TNFP01375 RNA5SP138-201ENST00000365098 114 ntBASIC1.73□□□□□ -2.13
TNFP01375 RPL23AP39-201ENST00000415533 405 ntBASIC1.73□□□□□ -2.13
TNFP01375 TMEM167AP1-201ENST00000423409 219 ntBASIC1.73□□□□□ -2.13
TNFP01375 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFP01375 AL645568.3-201ENST00000433683 316 ntBASIC1.73□□□□□ -2.13
TNFP01375 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.73□□□□□ -2.13
TNFP01375 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.73□□□□□ -2.13
TNFP01375 AC022493.1-201ENST00000492984 337 ntBASIC1.73□□□□□ -2.13
TNFP01375 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFP01375 AC108157.1-201ENST00000510511 539 ntBASIC1.73□□□□□ -2.13
TNFP01375 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
TNFP01375 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.73□□□□□ -2.13
TNFP01375 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
TNFP01375 AC010546.1-201ENST00000569391 485 ntBASIC1.73□□□□□ -2.13
TNFP01375 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFP01375 OR4G1P-201ENST00000588632 938 ntBASIC1.73□□□□□ -2.13
TNFP01375 AC013444.2-201ENST00000603317 787 ntBASIC1.73□□□□□ -2.13
TNFP01375 HSPE1P7-201ENST00000604681 321 ntBASIC1.73□□□□□ -2.13
TNFP01375 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.73□□□□□ -2.13
TNFP01375 AL355810.1-201ENST00000614629 552 ntBASIC1.73□□□□□ -2.13
TNFP01375 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
TNFP01375 AC108479.2-201ENST00000617314 601 ntBASIC1.73□□□□□ -2.13
TNFP01375 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFP01375 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFP01375 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFP01375 KPNA2P1-201ENST00000458289 1591 ntBASIC1.72□□□□□ -2.13
TNFP01375 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.72□□□□□ -2.13
TNFP01375 AC073264.1-201ENST00000411508 416 ntBASIC1.72□□□□□ -2.13
TNFP01375 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFP01375 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFP01375 AL645638.1-201ENST00000440519 361 ntBASIC1.72□□□□□ -2.13
TNFP01375 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.72□□□□□ -2.13
TNFP01375 NAP1L1P3-201ENST00000462291 880 ntBASIC1.72□□□□□ -2.13
TNFP01375 AC090515.1-201ENST00000465295 476 ntBASIC1.72□□□□□ -2.13
TNFP01375 AC090453.1-201ENST00000495560 436 ntBASIC1.72□□□□□ -2.13
TNFP01375 KLRA1P-201ENST00000503499 986 ntBASIC1.72□□□□□ -2.13
TNFP01375 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFP01375 SNORA31.8-201ENST00000516327 108 ntBASIC1.72□□□□□ -2.13
TNFP01375 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TNFP01375 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFP01375 AL138976.2-201ENST00000563989 694 ntBASIC1.72□□□□□ -2.13
TNFP01375 AC087481.2-201ENST00000565492 330 ntBASIC1.72□□□□□ -2.13
TNFP01375 AGGF1P5-201ENST00000567900 919 ntBASIC1.72□□□□□ -2.13
TNFP01375 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.72□□□□□ -2.13
TNFP01375 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
TNFP01375 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TNFP01375 AL360181.4-201ENST00000621752 134 ntBASIC1.72□□□□□ -2.13
TNFP01375 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
TNFP01375 AL109809.4-201ENST00000603520 2185 ntBASIC1.72□□□□□ -2.13
TNFP01375 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
TNFP01375 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.72□□□□□ -2.13
TNFP01375 MTCO1P9-201ENST00000505577 1534 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC009812.4-201ENST00000569134 1805 ntBASIC1.71□□□□□ -2.14
TNFP01375 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TNFP01375 RNA5SP354-201ENST00000391247 136 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.71□□□□□ -2.14
TNFP01375 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.71□□□□□ -2.14
TNFP01375 ARL2BPP3-201ENST00000421226 480 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.71□□□□□ -2.14
TNFP01375 GPM6BP3-201ENST00000442797 145 ntBASIC1.71□□□□□ -2.14
TNFP01375 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms