Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL359219.2-201ENST00000555184 348 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 MIR4277-201ENST00000578298 84 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 MIR5701-3-201ENST00000578890 82 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 RN7SL690P-201ENST00000582087 240 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 MIR5701-1-201ENST00000585138 82 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 AL158827.2-201ENST00000602494 330 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 AL078605.1-201ENST00000603529 500 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 AL160281.1-201ENST00000605307 311 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 AL158032.1-201ENST00000605401 106 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 MIR5701-2-201ENST00000615634 82 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.93□□□□□ -1.46
ALDH1A1P00352 AL691447.3-201ENST00000635020 330 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 MIR6830-201ENST00000636015 70 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 AC090740.1-201ENST00000623193 2262 ntBASIC5.93□□□□□ -1.46
ALDH1A1P00352 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.93□□□□□ -1.46
ALDH1A1P00352 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ALDH1A1P00352 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ALDH1A1P00352 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ALDH1A1P00352 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ALDH1A1P00352 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 Y_RNA.27-201ENST00000362540 103 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNU6-1020P-201ENST00000363684 107 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNA5SP479-201ENST00000364858 117 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 SNORD82-201ENST00000365530 70 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNU6-790P-201ENST00000384479 105 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNU6-1168P-201ENST00000390831 104 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 Y_RNA.581-201ENST00000391017 97 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNA5SP251-201ENST00000410614 137 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 RNU6-516P-201ENST00000411381 104 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 RPS6P12-201ENST00000432491 726 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC091180.1-201ENST00000462104 372 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 PPIAP21-201ENST00000464473 501 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 MIR4504-201ENST00000577413 92 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 LINC02555-201ENST00000563933 1951 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC116667.1-201ENST00000604855 2072 ntBASIC5.92□□□□□ -1.46
ALDH1A1P00352 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
ALDH1A1P00352 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ALDH1A1P00352 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 BCORP1-203ENST00000513194 5093 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 RNA5SP388-201ENST00000362584 119 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 Y_RNA.240-201ENST00000364469 95 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 RNU6-1303P-201ENST00000364841 107 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 RNY4P28-201ENST00000365281 93 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 Y_RNA.383-201ENST00000383855 97 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 Y_RNA.398-201ENST00000383952 99 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 U3.39-201ENST00000408569 239 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 BMS1P22-201ENST00000414726 313 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 BX842559.1-201ENST00000419615 532 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC007098.1-201ENST00000420122 367 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC004975.1-201ENST00000428733 208 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 MTND3P9-201ENST00000429526 346 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 COX7A2P2-201ENST00000505291 250 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 ERHP1-201ENST00000523006 310 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC008814.1-201ENST00000603797 406 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 AC008962.1-201ENST00000605729 304 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.91□□□□□ -1.46
ALDH1A1P00352 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ALDH1A1P00352 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ALDH1A1P00352 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ALDH1A1P00352 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ALDH1A1P00352 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms