Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.37□□□□□ -1.71
CNOT4O95628 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.37□□□□□ -1.71
CNOT4O95628 AC015813.6-201ENST00000624409 5808 ntBASIC4.37□□□□□ -1.71
CNOT4O95628 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.37□□□□□ -1.71
CNOT4O95628 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNOT4O95628 AC100778.3-201ENST00000580060 1750 ntBASIC4.37□□□□□ -1.71
CNOT4O95628 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNOT4O95628 AC004925.1-201ENST00000624256 2706 ntBASIC4.37□□□□□ -1.71
CNOT4O95628 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 AL731532.2-201ENST00000623542 1953 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC121333.1-201ENST00000567488 2709 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 Y_RNA.112-201ENST00000363250 102 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RNU6-179P-201ENST00000363350 107 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 AC117470.1-201ENST00000381974 330 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 U3.32-201ENST00000408116 212 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC114755.2-201ENST00000413520 361 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AF186996.5-201ENST00000418098 904 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AL139396.1-201ENST00000421137 167 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RPL21P66-201ENST00000426566 466 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC112498.1-201ENST00000444401 332 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 MRPS31P2-201ENST00000451581 518 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.36□□□□□ -1.71
CNOT4O95628 SNORD121B-201ENST00000458838 81 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RNA5SP103-201ENST00000459503 118 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RPS17P2-201ENST00000461663 408 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC079804.1-201ENST00000461922 436 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RPL9P32-201ENST00000464118 620 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 AL135752.1-201ENST00000479477 471 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RPL31P13-201ENST00000484151 370 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC098591.2-201ENST00000510152 315 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 RNU6-566P-201ENST00000516790 107 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.36□□□□□ -1.71
CNOT4O95628 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.36□□□□□ -1.71
CNOT4O95628 IMMP1LP2-201ENST00000552954 492 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 MIR4790-201ENST00000577799 79 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 MIR4503-201ENST00000582187 83 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 VN1R107P-201ENST00000601784 209 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC022893.3-201ENST00000607665 437 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AP001486.3-201ENST00000615334 372 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AC048347.1-201ENST00000624621 427 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 OR52H1-202ENST00000641796 1061 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 MTND5P10-201ENST00000603719 1809 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNOT4O95628 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
CNOT4O95628 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 MTND4P1-201ENST00000457501 1466 ntBASIC4.36□□□□□ -1.71
CNOT4O95628 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CNOT4O95628 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.36□□□□□ -1.71
CNOT4O95628 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 AL442639.1-201ENST00000625030 1899 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CNOT4O95628 RPL32P3-201ENST00000359025 275 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 RNU6-1188P-201ENST00000363795 107 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 SNORA70.10-201ENST00000384515 134 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 CISD1P1-201ENST00000393907 327 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL359643.1-201ENST00000404109 423 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 RNU6-712P-201ENST00000410558 100 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.35□□□□□ -1.71
CNOT4O95628 FABP5P14-201ENST00000437273 393 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.35□□□□□ -1.71
CNOT4O95628 RPL23AP43-201ENST00000446445 471 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AC073264.2-201ENST00000448886 166 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 ELOCP24-201ENST00000456370 334 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AC004801.2-202ENST00000463559 283 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNOT4O95628 TRBVA-201ENST00000498804 316 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 CCDC34P1-201ENST00000507441 517 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 MTCYBP40-201ENST00000509390 1135 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 RNU6-1073P-201ENST00000517182 106 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 RPL23AP53-201ENST00000521854 457 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.35□□□□□ -1.71
CNOT4O95628 COX6CP5-201ENST00000527162 228 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AP006289.1-201ENST00000538089 277 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 AL117187.1-201ENST00000555482 181 ntBASIC4.35□□□□□ -1.71
CNOT4O95628 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.35□□□□□ -1.71
CNOT4O95628 AC004817.2-201ENST00000561794 651 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms