Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.15□□□□□ -2.07
POLR1AO95602 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.15□□□□□ -2.07
POLR1AO95602 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.15□□□□□ -2.07
POLR1AO95602 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 AL133216.2-202ENST00000634512 349 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 AC006026.1-201ENST00000444025 1803 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR1AO95602 RPL21P134-201ENST00000453468 483 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR1AO95602 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR1AO95602 COX6CP14-201ENST00000469580 174 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR1AO95602 AC010735.1-201ENST00000567305 1026 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 AC006270.2-201ENST00000578523 652 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 MTATP6P3-201ENST00000581686 676 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 AC126118.1-201ENST00000607744 628 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 MIR7973-1-201ENST00000614683 76 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.14□□□□□ -2.07
POLR1AO95602 AL513185.2-201ENST00000425543 193 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR1AO95602 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 AC016957.1-201ENST00000534895 309 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 MIR3660-201ENST00000584845 100 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 MIR6078-201ENST00000611069 100 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 U73479.1-201ENST00000618062 168 ntBASIC2.14□□□□□ -2.07
POLR1AO95602 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.14□□□□□ -2.07
POLR1AO95602 RNA5SP363-201ENST00000365072 115 ntBASIC2.13□□□□□ -2.07
POLR1AO95602 RNU6-1263P-201ENST00000384601 106 ntBASIC2.13□□□□□ -2.07
POLR1AO95602 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR1AO95602 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.13□□□□□ -2.07
POLR1AO95602 AC022493.1-201ENST00000492984 337 ntBASIC2.13□□□□□ -2.07
POLR1AO95602 AC090953.1-201ENST00000604305 1092 ntBASIC2.13□□□□□ -2.07
POLR1AO95602 AC132825.8-201ENST00000640783 297 ntBASIC2.13□□□□□ -2.07
POLR1AO95602 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
POLR1AO95602 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR1AO95602 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR1AO95602 RNU1-52P-201ENST00000384190 164 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 AL354695.1-201ENST00000427935 228 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 HMGB3P10-201ENST00000434734 572 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 AP005660.1-201ENST00000522972 293 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 MIR3122-201ENST00000577243 73 ntBASIC2.12□□□□□ -2.07
POLR1AO95602 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR1AO95602 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR1AO95602 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
POLR1AO95602 RNU6-234P-201ENST00000365229 104 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 MIR598-201ENST00000384868 97 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 CLIC4P1-201ENST00000453177 535 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR1AO95602 RPS29P1-201ENST00000465274 159 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR1AO95602 AL163153.1-201ENST00000554223 283 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AC109446.2-201ENST00000567872 497 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 MIR4512-201ENST00000583257 77 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.11□□□□□ -2.07
POLR1AO95602 MIR6788-201ENST00000618842 66 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AC068700.1-201ENST00000565862 3754 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
POLR1AO95602 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.11□□□□□ -2.07
POLR1AO95602 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLR1AO95602 RNU1-22P-201ENST00000363334 158 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR1AO95602 SNX5P1-201ENST00000505757 1041 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.11□□□□□ -2.07
POLR1AO95602 BNIP3P4-201ENST00000604946 565 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 CFTRP2-201ENST00000634304 199 ntBASIC2.11□□□□□ -2.07
POLR1AO95602 MAPK10-266ENST00000641066 6555 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
POLR1AO95602 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 AC090774.1-201ENST00000435925 246 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 ELOCP10-201ENST00000440624 327 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR1AO95602 SNORD116-26-201ENST00000516006 96 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR1AO95602 ELOCP34-201ENST00000604436 327 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.1□□□□□ -2.07
POLR1AO95602 AC009318.3-201ENST00000616916 503 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 MTCO1P4-201ENST00000520516 1409 ntBASIC2.1□□□□□ -2.07
POLR1AO95602 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
POLR1AO95602 CALM1P1-201ENST00000442082 433 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.09□□□□□ -2.07
POLR1AO95602 AC008885.2-201ENST00000509506 930 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 MTCO3P44-201ENST00000510977 541 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
POLR1AO95602 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.09□□□□□ -2.07
POLR1AO95602 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.09□□□□□ -2.07
POLR1AO95602 AL135786.2-201ENST00000608422 615 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 MKKS-204ENST00000639674 192 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 CDC27P3-201ENST00000635418 1910 ntBASIC2.09□□□□□ -2.07
POLR1AO95602 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
POLR1AO95602 Y_RNA.374-201ENST00000365606 101 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 RNU6-1080P-201ENST00000383982 107 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 BX682237.1-201ENST00000415016 335 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC022431.1-201ENST00000450941 438 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.08□□□□□ -2.08
POLR1AO95602 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms