Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SNORA6-201ENST00000384033 151 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC096533.1-201ENST00000411645 353 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.95□□□□□ -2.1
LTN1O94822 HMGB1P45-201ENST00000435986 653 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LTN1O94822 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.95□□□□□ -2.1
LTN1O94822 AL133507.1-201ENST00000605269 557 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC068944.2-201ENST00000610373 403 ntBASIC1.95□□□□□ -2.1
LTN1O94822 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
LTN1O94822 AC073264.1-201ENST00000411508 416 ntBASIC1.95□□□□□ -2.1
LTN1O94822 Z85995.1-201ENST00000415547 335 ntBASIC1.95□□□□□ -2.1
LTN1O94822 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.95□□□□□ -2.1
LTN1O94822 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.95□□□□□ -2.1
LTN1O94822 HMGN2P30-201ENST00000423237 256 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.95□□□□□ -2.1
LTN1O94822 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.95□□□□□ -2.1
LTN1O94822 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.95□□□□□ -2.1
LTN1O94822 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.95□□□□□ -2.1
LTN1O94822 MIR5194-201ENST00000582634 120 ntBASIC1.95□□□□□ -2.1
LTN1O94822 AC010928.2-201ENST00000588017 287 ntBASIC1.95□□□□□ -2.1
LTN1O94822 MIR6515-201ENST00000619843 57 ntBASIC1.95□□□□□ -2.1
LTN1O94822 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
LTN1O94822 ZNF33CP-201ENST00000432492 2030 ntBASIC1.94□□□□□ -2.1
LTN1O94822 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 ZNF209P-201ENST00000593450 2304 ntBASIC1.94□□□□□ -2.1
LTN1O94822 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
LTN1O94822 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 CD24P4-201ENST00000382840 243 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC013404.1-201ENST00000413068 249 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.94□□□□□ -2.1
LTN1O94822 AL513185.2-201ENST00000425543 193 ntBASIC1.94□□□□□ -2.1
LTN1O94822 MOB1AP2-201ENST00000446060 614 ntBASIC1.94□□□□□ -2.1
LTN1O94822 PPP1R2P5-201ENST00000457256 603 ntBASIC1.94□□□□□ -2.1
LTN1O94822 SNORD121B-201ENST00000458838 81 ntBASIC1.94□□□□□ -2.1
LTN1O94822 MRPL42P6-201ENST00000486397 371 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.94□□□□□ -2.1
LTN1O94822 RNA5SP102-201ENST00000516865 106 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
LTN1O94822 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.94□□□□□ -2.1
LTN1O94822 AC125611.2-201ENST00000551907 647 ntBASIC1.94□□□□□ -2.1
LTN1O94822 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 SEPT7P9-203ENST00000604116 343 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.94□□□□□ -2.1
LTN1O94822 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTN1O94822 AC008083.4-201ENST00000615076 444 ntBASIC1.94□□□□□ -2.1
LTN1O94822 NR1H5P-201ENST00000452683 1377 ntBASIC1.94□□□□□ -2.1
LTN1O94822 AC008568.2-201ENST00000623862 2313 ntBASIC1.94□□□□□ -2.1
LTN1O94822 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LTN1O94822 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
LTN1O94822 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.93□□□□□ -2.1
LTN1O94822 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.93□□□□□ -2.1
LTN1O94822 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.93□□□□□ -2.1
LTN1O94822 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.93□□□□□ -2.1
LTN1O94822 MIR3660-201ENST00000584845 100 ntBASIC1.93□□□□□ -2.1
LTN1O94822 AL161734.1-201ENST00000609720 557 ntBASIC1.93□□□□□ -2.1
LTN1O94822 MIR6840-201ENST00000611937 71 ntBASIC1.93□□□□□ -2.1
LTN1O94822 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.93□□□□□ -2.1
LTN1O94822 MTND5P3-201ENST00000438536 1800 ntBASIC1.93□□□□□ -2.1
LTN1O94822 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
LTN1O94822 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.93□□□□□ -2.1
LTN1O94822 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.93□□□□□ -2.1
LTN1O94822 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LTN1O94822 RNU6-1027P-201ENST00000383998 107 ntBASIC1.93□□□□□ -2.1
LTN1O94822 SNORA67.6-201ENST00000391093 99 ntBASIC1.93□□□□□ -2.1
LTN1O94822 AL358075.3-201ENST00000426289 226 ntBASIC1.93□□□□□ -2.1
LTN1O94822 AL353898.1-201ENST00000444055 238 ntBASIC1.93□□□□□ -2.1
LTN1O94822 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.93□□□□□ -2.1
LTN1O94822 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.93□□□□□ -2.1
LTN1O94822 AC008427.1-201ENST00000503102 655 ntBASIC1.93□□□□□ -2.1
LTN1O94822 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.93□□□□□ -2.1
LTN1O94822 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LTN1O94822 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.93□□□□□ -2.1
LTN1O94822 RNA5SP325-201ENST00000363756 130 ntBASIC1.92□□□□□ -2.1
LTN1O94822 MIR1304-201ENST00000408243 91 ntBASIC1.92□□□□□ -2.1
LTN1O94822 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.92□□□□□ -2.1
LTN1O94822 MORF4L1P7-201ENST00000426038 703 ntBASIC1.92□□□□□ -2.1
LTN1O94822 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.92□□□□□ -2.1
LTN1O94822 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
LTN1O94822 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.92□□□□□ -2.1
LTN1O94822 RN7SKP234-201ENST00000517173 224 ntBASIC1.92□□□□□ -2.1
LTN1O94822 SUB1P1-201ENST00000524415 382 ntBASIC1.92□□□□□ -2.1
LTN1O94822 AC022079.2-201ENST00000619739 566 ntBASIC1.92□□□□□ -2.1
LTN1O94822 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.91□□□□□ -2.1
LTN1O94822 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
LTN1O94822 ATP5J2P3-201ENST00000451550 258 ntBASIC1.91□□□□□ -2.1
LTN1O94822 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.91□□□□□ -2.1
LTN1O94822 OR5AQ1P-201ENST00000527596 927 ntBASIC1.91□□□□□ -2.1
LTN1O94822 NBEAP1-201ENST00000554452 979 ntBASIC1.91□□□□□ -2.1
LTN1O94822 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.91□□□□□ -2.1
LTN1O94822 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.91□□□□□ -2.1
LTN1O94822 SNORD114-26-201ENST00000363543 72 ntBASIC1.9□□□□□ -2.1
LTN1O94822 SNORA7.2-201ENST00000364446 145 ntBASIC1.9□□□□□ -2.1
LTN1O94822 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
LTN1O94822 AL136133.1-201ENST00000413694 376 ntBASIC1.9□□□□□ -2.1
LTN1O94822 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
LTN1O94822 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms