Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 BX664608.1-201ENST00000610519 487 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 RMST_3.1-201ENST00000611651 109 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDKL5O76039 AL136221.1-201ENST00000621449 509 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 MTND1P37-201ENST00000636562 264 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDKL5O76039 AC090229.1-201ENST00000590983 1609 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.38□□□□□ -1.71
CDKL5O76039 AC092125.1-201ENST00000562568 1995 ntBASIC4.38□□□□□ -1.71
CDKL5O76039 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.38□□□□□ -1.71
CDKL5O76039 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CDKL5O76039 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 AP004289.2-201ENST00000444413 1457 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDKL5O76039 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDKL5O76039 RNU6-451P-201ENST00000362921 107 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNA5SP391-201ENST00000363456 119 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNY3P3-201ENST00000363816 102 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNU4-1-201ENST00000363925 141 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNU6-1322P-201ENST00000364309 107 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 SNORD6-201ENST00000365444 73 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RPL31P1-201ENST00000398116 372 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RHEBP3-201ENST00000411920 351 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 SNRPEP10-201ENST00000420249 274 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC009965.2-201ENST00000425328 970 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AL513185.2-201ENST00000425543 193 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AL035410.1-201ENST00000427409 427 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 AC093019.1-201ENST00000443135 252 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 HSPE1P28-201ENST00000443139 211 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RPS26P56-201ENST00000444468 240 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 NUTF2P7-201ENST00000453086 375 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNU7-170P-201ENST00000459303 61 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 PABPC1P3-201ENST00000469174 459 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL5O76039 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 AL136126.1-201ENST00000473603 402 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RPL36AP51-201ENST00000487216 318 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 RNU6-352P-201ENST00000516908 107 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL5O76039 MIR3167-201ENST00000579623 85 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 MIR3118-1-201ENST00000581787 76 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL5O76039 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.37□□□□□ -1.71
CDKL5O76039 AL353997.4-201ENST00000586196 166 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL5O76039 AL391261.4-201ENST00000616012 481 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.37□□□□□ -1.71
CDKL5O76039 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 AC079684.1-201ENST00000621405 437 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC091953.2-201ENST00000623979 160 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC024614.3-201ENST00000637860 256 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDKL5O76039 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 AC006026.1-201ENST00000444025 1803 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.37□□□□□ -1.71
CDKL5O76039 NMD3P1-201ENST00000439704 1488 ntBASIC4.37□□□□□ -1.71
CDKL5O76039 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
CDKL5O76039 FAM91A3P-201ENST00000456826 2544 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDKL5O76039 RNU4-73P-201ENST00000363164 141 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 Y_RNA.356-201ENST00000365475 113 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDKL5O76039 Y_RNA.529-201ENST00000384586 119 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AL024474.1-201ENST00000404655 591 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.36□□□□□ -1.71
CDKL5O76039 MTATP6P18-201ENST00000417994 673 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RPL21P109-201ENST00000422213 475 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.36□□□□□ -1.71
CDKL5O76039 AL031736.2-201ENST00000426573 787 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AL591419.1-201ENST00000427423 339 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CDKL5O76039 CALM1P1-201ENST00000442082 433 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RPL21P133-201ENST00000443666 476 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AL118496.2-201ENST00000448300 230 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 SNRPGP6-201ENST00000451124 220 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RPL7L1P8-201ENST00000469911 741 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC087879.1-201ENST00000474343 374 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RPL7P47-201ENST00000497299 556 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC010587.1-201ENST00000505809 469 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 RN7SKP83-201ENST00000516512 178 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 SCARNA14-201ENST00000516903 136 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.36□□□□□ -1.71
CDKL5O76039 OR5AL2P-201ENST00000532185 920 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.36□□□□□ -1.71
CDKL5O76039 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.36□□□□□ -1.71
CDKL5O76039 AC034105.3-201ENST00000565294 442 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.36□□□□□ -1.71
CDKL5O76039 MIR4504-201ENST00000577413 92 ntBASIC4.36□□□□□ -1.71
CDKL5O76039 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms