Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF40O75150 ACA64.4-201ENST00000459070 127 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AC006499.3-201ENST00000506077 748 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF40O75150 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF40O75150 AC006427.1-201ENST00000514359 712 ntBASIC6.15□□□□□ -1.42
RNF40O75150 RNU1-86P-201ENST00000516108 154 ntBASIC6.15□□□□□ -1.42
RNF40O75150 RNU1-107P-201ENST00000516617 154 ntBASIC6.15□□□□□ -1.42
RNF40O75150 SNORA70.20-201ENST00000516848 126 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF40O75150 AC091078.2-201ENST00000557145 559 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF40O75150 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 AC010547.6-201ENST00000571789 193 ntBASIC6.15□□□□□ -1.42
RNF40O75150 MIR4659A-201ENST00000580269 81 ntBASIC6.15□□□□□ -1.42
RNF40O75150 BRDTP1-201ENST00000605735 677 ntBASIC6.15□□□□□ -1.42
RNF40O75150 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.15□□□□□ -1.43
RNF40O75150 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
RNF40O75150 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF40O75150 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RNF40O75150 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF40O75150 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
RNF40O75150 IQCB2P-201ENST00000401788 1633 ntBASIC6.14□□□□□ -1.43
RNF40O75150 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF40O75150 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RNF40O75150 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF40O75150 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF40O75150 UBE2WP1-201ENST00000362030 340 ntBASIC6.14□□□□□ -1.43
RNF40O75150 Y_RNA.286-201ENST00000364813 102 ntBASIC6.14□□□□□ -1.43
RNF40O75150 Y_RNA.488-201ENST00000384403 102 ntBASIC6.14□□□□□ -1.43
RNF40O75150 Y_RNA.623-201ENST00000411128 95 ntBASIC6.14□□□□□ -1.43
RNF40O75150 TMSB10P2-201ENST00000416049 131 ntBASIC6.14□□□□□ -1.43
RNF40O75150 RPS15AP40-201ENST00000419621 391 ntBASIC6.14□□□□□ -1.43
RNF40O75150 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF40O75150 AL358453.1-201ENST00000422522 250 ntBASIC6.14□□□□□ -1.43
RNF40O75150 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF40O75150 RPL37P6-202ENST00000464216 403 ntBASIC6.14□□□□□ -1.43
RNF40O75150 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF40O75150 RNY3P16-201ENST00000516338 101 ntBASIC6.14□□□□□ -1.43
RNF40O75150 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.14□□□□□ -1.43
RNF40O75150 AC011476.5-201ENST00000615594 130 ntBASIC6.14□□□□□ -1.43
RNF40O75150 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
RNF40O75150 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
RNF40O75150 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
RNF40O75150 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF40O75150 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF40O75150 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RNF40O75150 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF40O75150 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF40O75150 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RNF40O75150 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF40O75150 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.13□□□□□ -1.43
RNF40O75150 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF40O75150 RN7SKP227-201ENST00000364445 330 ntBASIC6.13□□□□□ -1.43
RNF40O75150 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF40O75150 MIR1178-201ENST00000408396 91 ntBASIC6.13□□□□□ -1.43
RNF40O75150 GPS2P1-201ENST00000411761 986 ntBASIC6.13□□□□□ -1.43
RNF40O75150 AC099677.1-201ENST00000420575 175 ntBASIC6.13□□□□□ -1.43
RNF40O75150 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF40O75150 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF40O75150 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF40O75150 SSXP4-201ENST00000451349 245 ntBASIC6.13□□□□□ -1.43
RNF40O75150 RPS27AP13-201ENST00000498403 237 ntBASIC6.13□□□□□ -1.43
RNF40O75150 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF40O75150 RNU6-390P-201ENST00000516259 103 ntBASIC6.13□□□□□ -1.43
RNF40O75150 IGLVIV-53-201ENST00000520107 367 ntBASIC6.13□□□□□ -1.43
RNF40O75150 CASP1P1-201ENST00000526345 212 ntBASIC6.13□□□□□ -1.43
RNF40O75150 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF40O75150 AC024614.2-201ENST00000577584 372 ntBASIC6.13□□□□□ -1.43
RNF40O75150 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.13□□□□□ -1.43
RNF40O75150 AL589674.2-201ENST00000604304 337 ntBASIC6.13□□□□□ -1.43
RNF40O75150 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF40O75150 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RNF40O75150 AL022311.1-201ENST00000623726 19416 ntBASIC6.13□□□□□ -1.43
RNF40O75150 AC010266.2-201ENST00000564741 3255 ntBASIC6.13□□□□□ -1.43
RNF40O75150 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF40O75150 ZNF826P-207ENST00000622273 1910 ntBASIC6.13□□□□□ -1.43
RNF40O75150 THAP12P9-201ENST00000503971 2360 ntBASIC6.13□□□□□ -1.43
RNF40O75150 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF40O75150 Y_RNA.43-201ENST00000362670 111 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RNVU1-3-201ENST00000364313 161 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RNU105B-201ENST00000364478 208 ntBASIC6.12□□□□□ -1.43
RNF40O75150 Y_RNA.261-201ENST00000364631 102 ntBASIC6.12□□□□□ -1.43
RNF40O75150 RNU6-339P-201ENST00000384310 107 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms