Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.4□□□□□ -1.87
CACNA1FO60840 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.4□□□□□ -1.87
CACNA1FO60840 MTCYBP41-201ENST00000528913 1123 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AP000857.1-201ENST00000532151 543 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 CBX3P5-201ENST00000552017 521 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 SERPINE4P-201ENST00000554978 281 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AGGF1P8-201ENST00000562979 1000 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.4□□□□□ -1.87
CACNA1FO60840 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC103881.1-201ENST00000603476 538 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC091946.2-201ENST00000606105 291 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC008498.1-201ENST00000613012 531 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CACNA1FO60840 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CACNA1FO60840 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CACNA1FO60840 RNU1-100P-201ENST00000365255 165 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AL512633.1-201ENST00000399931 655 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.39□□□□□ -1.87
CACNA1FO60840 USP9YP33-201ENST00000412220 421 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1FO60840 RPL30P16-201ENST00000419341 429 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1FO60840 TRIM60P18-201ENST00000441518 828 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1FO60840 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1FO60840 RPL21P71-201ENST00000465598 459 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AC109486.1-201ENST00000486833 374 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1FO60840 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AC138915.2-201ENST00000569776 97 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AC138761.3-201ENST00000579993 334 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 MIR4513-201ENST00000581077 86 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AL355073.2-201ENST00000612106 557 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 AC005332.6-201ENST00000613178 446 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AC116563.2-201ENST00000624751 535 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1FO60840 AC006927.3-201ENST00000638789 384 ntBASIC3.39□□□□□ -1.87
CACNA1FO60840 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CACNA1FO60840 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CACNA1FO60840 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CACNA1FO60840 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 SNORA51.4-201ENST00000364993 124 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 RPS4XP8-201ENST00000402039 771 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 TMSB4XP8-201ENST00000402089 135 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 TMSB4XP6-201ENST00000415187 135 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 RPLP0P7-201ENST00000416050 667 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 TMSB4XP1-201ENST00000424567 135 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC104651.1-201ENST00000427559 735 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 MTCO3P11-201ENST00000455103 774 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 HIGD1AP3-201ENST00000515857 278 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 RNU6-405P-201ENST00000516637 110 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 RN7SKP82-201ENST00000516786 223 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AP002963.1-201ENST00000530590 184 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 HPRT1P3-201ENST00000539521 576 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.38□□□□□ -1.87
CACNA1FO60840 MIR4635-201ENST00000583759 79 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AL137790.1-201ENST00000634283 177 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 U6.107-201ENST00000637108 79 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 MTCO1P14-201ENST00000441695 1559 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 MTCO1P23-201ENST00000415223 1526 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 SNORA4.1-201ENST00000364263 144 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 Y_RNA.359-201ENST00000365498 102 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 RPL30P3-201ENST00000424262 333 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 USP9YP29-201ENST00000445112 563 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms