Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 BNIP3P8-201ENST00000597863 560 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC090425.2-201ENST00000608818 501 ntBASIC3.31□□□□□ -1.88
SSX4O60224 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX4O60224 TUG1_2.1-201ENST00000614234 87 ntBASIC3.31□□□□□ -1.88
SSX4O60224 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC099654.13-201ENST00000639774 207 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
SSX4O60224 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 AC021755.1-201ENST00000559747 1447 ntBASIC3.3□□□□□ -1.88
SSX4O60224 DEFB108F-201ENST00000344638 222 ntBASIC3.3□□□□□ -1.88
SSX4O60224 RNU5A-8P-201ENST00000364102 114 ntBASIC3.3□□□□□ -1.88
SSX4O60224 SNORA23-201ENST00000365128 182 ntBASIC3.3□□□□□ -1.88
SSX4O60224 SNORA5A-201ENST00000384111 134 ntBASIC3.3□□□□□ -1.88
SSX4O60224 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSX4O60224 AP000567.1-201ENST00000406413 156 ntBASIC3.3□□□□□ -1.88
SSX4O60224 HMGN1P14-201ENST00000412459 517 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 YPEL5P1-201ENST00000419731 367 ntBASIC3.3□□□□□ -1.88
SSX4O60224 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
SSX4O60224 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 TIMM9P1-201ENST00000436122 256 ntBASIC3.3□□□□□ -1.88
SSX4O60224 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 AL592447.1-201ENST00000447592 540 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX4O60224 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 PRSS3P4-201ENST00000453323 162 ntBASIC3.3□□□□□ -1.88
SSX4O60224 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.3□□□□□ -1.88
SSX4O60224 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
SSX4O60224 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
SSX4O60224 RN7SL442P-201ENST00000473804 320 ntBASIC3.3□□□□□ -1.88
SSX4O60224 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX4O60224 AC026403.1-201ENST00000518938 295 ntBASIC3.3□□□□□ -1.88
SSX4O60224 RPL12P22-201ENST00000519073 490 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC107934.1-201ENST00000522215 217 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AP003181.2-201ENST00000528941 181 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AP003122.4-201ENST00000530980 758 ntBASIC3.3□□□□□ -1.88
SSX4O60224 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.3□□□□□ -1.88
SSX4O60224 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 AC087499.8-201ENST00000578406 226 ntBASIC3.3□□□□□ -1.88
SSX4O60224 MIR3146-201ENST00000580367 79 ntBASIC3.3□□□□□ -1.88
SSX4O60224 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 AC009977.1-201ENST00000586015 570 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC121334.2-201ENST00000605387 271 ntBASIC3.3□□□□□ -1.88
SSX4O60224 RN7SKP299-201ENST00000606679 301 ntBASIC3.3□□□□□ -1.88
SSX4O60224 AC245517.5-201ENST00000611529 162 ntBASIC3.3□□□□□ -1.88
SSX4O60224 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX4O60224 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX4O60224 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX4O60224 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX4O60224 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 RNU5A-1-201ENST00000362698 116 ntBASIC3.29□□□□□ -1.88
SSX4O60224 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
SSX4O60224 Y_RNA.51-201ENST00000362725 102 ntBASIC3.29□□□□□ -1.88
SSX4O60224 RNU6-223P-201ENST00000362830 107 ntBASIC3.29□□□□□ -1.88
SSX4O60224 Y_RNA.553-201ENST00000384670 102 ntBASIC3.29□□□□□ -1.88
SSX4O60224 U8.11-201ENST00000384699 133 ntBASIC3.29□□□□□ -1.88
SSX4O60224 U8.12-201ENST00000384701 133 ntBASIC3.29□□□□□ -1.88
SSX4O60224 SNORA40.3-201ENST00000390964 122 ntBASIC3.29□□□□□ -1.88
SSX4O60224 RPL21P17-201ENST00000397467 475 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AL109755.1-201ENST00000401791 649 ntBASIC3.29□□□□□ -1.88
SSX4O60224 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX4O60224 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 MTCO1P19-201ENST00000443487 500 ntBASIC3.29□□□□□ -1.88
SSX4O60224 USP9YP29-201ENST00000445112 563 ntBASIC3.29□□□□□ -1.88
SSX4O60224 PDSS1P2-201ENST00000449397 678 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX4O60224 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 RNU6-956P-201ENST00000458868 103 ntBASIC3.29□□□□□ -1.88
SSX4O60224 U8.18-201ENST00000459285 133 ntBASIC3.29□□□□□ -1.88
SSX4O60224 MTND4LP3-201ENST00000468320 276 ntBASIC3.29□□□□□ -1.88
SSX4O60224 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSX4O60224 HSPE1P6-201ENST00000479457 291 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX4O60224 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 SNORA70.16-201ENST00000516390 95 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AP003467.2-201ENST00000520175 319 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC022695.1-201ENST00000522089 237 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 AC008011.1-201ENST00000545989 227 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 RPL21P5-201ENST00000554662 472 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms