Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CR381572.1-201ENST00000625098 102 ntBASIC3.64□□□□□ -1.83
LDB2O43679 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.64□□□□□ -1.83
LDB2O43679 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LDB2O43679 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LDB2O43679 Y_RNA.9-201ENST00000362354 101 ntBASIC3.63□□□□□ -1.83
LDB2O43679 RNU5E-1-201ENST00000362477 120 ntBASIC3.63□□□□□ -1.83
LDB2O43679 RNU4-12P-201ENST00000365233 139 ntBASIC3.63□□□□□ -1.83
LDB2O43679 SNORD3H-201ENST00000384486 214 ntBASIC3.63□□□□□ -1.83
LDB2O43679 Y_RNA.548-201ENST00000384656 105 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.63□□□□□ -1.83
LDB2O43679 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.63□□□□□ -1.83
LDB2O43679 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.63□□□□□ -1.83
LDB2O43679 DPPA2P1-201ENST00000428060 556 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC073464.1-201ENST00000429823 534 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 FCF1P1-201ENST00000432690 571 ntBASIC3.63□□□□□ -1.83
LDB2O43679 USP9YP7-201ENST00000436723 430 ntBASIC3.63□□□□□ -1.83
LDB2O43679 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.63□□□□□ -1.83
LDB2O43679 RPL23AP33-201ENST00000442301 452 ntBASIC3.63□□□□□ -1.83
LDB2O43679 MTATP6P30-201ENST00000443540 664 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AL136380.1-201ENST00000447970 162 ntBASIC3.63□□□□□ -1.83
LDB2O43679 Z99127.3-201ENST00000448158 395 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC010655.1-201ENST00000449336 292 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 PPIAP3-201ENST00000450588 505 ntBASIC3.63□□□□□ -1.83
LDB2O43679 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.63□□□□□ -1.83
LDB2O43679 USP9YP32-201ENST00000452432 430 ntBASIC3.63□□□□□ -1.83
LDB2O43679 MTND1P9-201ENST00000453775 944 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC013267.1-201ENST00000458227 267 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC023598.1-201ENST00000472521 361 ntBASIC3.63□□□□□ -1.83
LDB2O43679 ST13P14-201ENST00000474095 734 ntBASIC3.63□□□□□ -1.83
LDB2O43679 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 AC010587.1-201ENST00000505809 469 ntBASIC3.63□□□□□ -1.83
LDB2O43679 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 MIR2114-201ENST00000516645 80 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 AC107934.1-201ENST00000522215 217 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB2O43679 FAM92A1P1-201ENST00000528023 890 ntBASIC3.63□□□□□ -1.83
LDB2O43679 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 OR4P1P-201ENST00000530808 1136 ntBASIC3.63□□□□□ -1.83
LDB2O43679 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.63□□□□□ -1.83
LDB2O43679 MIR98-201ENST00000606724 119 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AL391813.2-201ENST00000609113 322 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AL590282.1-201ENST00000610379 1136 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AL356321.1-201ENST00000621360 228 ntBASIC3.63□□□□□ -1.83
LDB2O43679 AC244100.1-202ENST00000621554 382 ntBASIC3.63□□□□□ -1.83
LDB2O43679 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 AC119674.1-207ENST00000641355 633 ntBASIC3.63□□□□□ -1.83
LDB2O43679 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.63□□□□□ -1.83
LDB2O43679 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB2O43679 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB2O43679 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB2O43679 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LDB2O43679 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB2O43679 NMD3P1-201ENST00000439704 1488 ntBASIC3.62□□□□□ -1.83
LDB2O43679 SNORA71.3-201ENST00000362582 128 ntBASIC3.62□□□□□ -1.83
LDB2O43679 RNU4-1-201ENST00000363925 141 ntBASIC3.62□□□□□ -1.83
LDB2O43679 SNORA73.2-201ENST00000364946 201 ntBASIC3.62□□□□□ -1.83
LDB2O43679 RNU6-356P-201ENST00000384140 107 ntBASIC3.62□□□□□ -1.83
LDB2O43679 RNU6-114P-201ENST00000384704 105 ntBASIC3.62□□□□□ -1.83
LDB2O43679 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LDB2O43679 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB2O43679 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB2O43679 AC019097.1-201ENST00000424783 735 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
LDB2O43679 YME1L1P1-201ENST00000429435 297 ntBASIC3.62□□□□□ -1.83
LDB2O43679 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB2O43679 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB2O43679 MTND1P12-201ENST00000455231 147 ntBASIC3.62□□□□□ -1.83
LDB2O43679 HMGB1P25-201ENST00000468402 607 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AL121769.1-201ENST00000469473 401 ntBASIC3.62□□□□□ -1.83
LDB2O43679 AC084357.1-201ENST00000473404 255 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms