Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 SNORA5B-201ENST00000363786 132 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 MIR634-201ENST00000385208 97 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 RNU6-952P-201ENST00000391164 108 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 RPL7L1P10-201ENST00000427790 463 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 RPL23AP58-201ENST00000440453 469 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AC009237.8-201ENST00000445492 379 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AL358794.1-201ENST00000445689 381 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 MTND1P16-201ENST00000465177 898 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AC003982.1-202ENST00000469928 248 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 RPL21P131-201ENST00000497298 483 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 RAC1P5-201ENST00000512182 576 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 RNU6-150P-201ENST00000516237 95 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 OR6C7P-201ENST00000547875 934 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
CLDN3O15551 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN3O15551 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.01□□□□□ -1.93
CLDN3O15551 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 BNIP3P26-201ENST00000600827 554 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 ATP1B3P1-201ENST00000605365 821 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN3O15551 AL161629.2-201ENST00000615347 275 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AL121895.2-201ENST00000619558 447 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN3O15551 OR4G2P-202ENST00000641004 1759 ntBASIC3□□□□□ -1.93
CLDN3O15551 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN3O15551 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN3O15551 RNU1-112P-201ENST00000364401 164 ntBASIC3□□□□□ -1.93
CLDN3O15551 MIR325-201ENST00000385260 98 ntBASIC3□□□□□ -1.93
CLDN3O15551 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN3O15551 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
CLDN3O15551 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3□□□□□ -1.93
CLDN3O15551 AC018630.2-202ENST00000422992 927 ntBASIC3□□□□□ -1.93
CLDN3O15551 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3□□□□□ -1.93
CLDN3O15551 AC002381.1-201ENST00000447049 280 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC007327.1-201ENST00000447461 264 ntBASIC3□□□□□ -1.93
CLDN3O15551 snoU13.28-201ENST00000459235 104 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3□□□□□ -1.93
CLDN3O15551 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3□□□□□ -1.93
CLDN3O15551 RNU1-103P-201ENST00000516502 125 ntBASIC3□□□□□ -1.93
CLDN3O15551 SNORA31.22-201ENST00000517204 135 ntBASIC3□□□□□ -1.93
CLDN3O15551 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3□□□□□ -1.93
CLDN3O15551 ACTR3BP3-201ENST00000565577 979 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3□□□□□ -1.93
CLDN3O15551 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3□□□□□ -1.93
CLDN3O15551 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3□□□□□ -1.93
CLDN3O15551 MIR3605-201ENST00000583214 100 ntBASIC3□□□□□ -1.93
CLDN3O15551 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC008277.2-201ENST00000605196 797 ntBASIC3□□□□□ -1.93
CLDN3O15551 AF129408.1-201ENST00000608767 431 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
CLDN3O15551 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3□□□□□ -1.93
CLDN3O15551 AC002550.2-201ENST00000621246 394 ntBASIC3□□□□□ -1.93
CLDN3O15551 OR5H6-203ENST00000642105 978 ntBASIC3□□□□□ -1.93
CLDN3O15551 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL390862.1-201ENST00000635467 1469 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN3O15551 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN3O15551 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN3O15551 RNU6-560P-201ENST00000364007 108 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 Y_RNA.548-201ENST00000384656 105 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 MIR9-1-201ENST00000385198 89 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN3O15551 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN3O15551 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL356320.2-201ENST00000417263 507 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN3O15551 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN3O15551 NANOGP2-201ENST00000435391 727 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN3O15551 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN3O15551 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN3O15551 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 RNU6-1256P-201ENST00000516539 103 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 RNU6-928P-201ENST00000516876 104 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 RNU6-714P-201ENST00000516963 103 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN3O15551 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL157394.1-201ENST00000562983 1224 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 VN1R90P-201ENST00000595717 726 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN3O15551 AC069431.2-201ENST00000604149 1099 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 AL158050.2-201ENST00000605336 568 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN3O15551 AL445264.1-201ENST00000621719 171 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 AL159972.1-201ENST00000625150 448 ntBASIC2.99□□□□□ -1.93
CLDN3O15551 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms