Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM1O15116 AC104978.1-201ENST00000449387 391 ntBASIC2.63□□□□□ -1.99
LSM1O15116 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 AC010374.2-201ENST00000512933 535 ntBASIC2.63□□□□□ -1.99
LSM1O15116 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 AC103783.1-201ENST00000520506 373 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 OR4R2P-201ENST00000530815 597 ntBASIC2.63□□□□□ -1.99
LSM1O15116 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 AL132857.1-201ENST00000555180 708 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 AC010546.1-201ENST00000569391 485 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM1O15116 BNIP3P33-201ENST00000598912 569 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AL390208.1-201ENST00000605885 644 ntBASIC2.63□□□□□ -1.99
LSM1O15116 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 AC245517.5-201ENST00000611529 162 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AC084824.5-201ENST00000612009 413 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AC004777.1-201ENST00000624317 287 ntBASIC2.63□□□□□ -1.99
LSM1O15116 OR5H6-203ENST00000642105 978 ntBASIC2.63□□□□□ -1.99
LSM1O15116 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM1O15116 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LSM1O15116 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
LSM1O15116 AC073346.2-201ENST00000624724 2058 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AL359693.1-201ENST00000614959 2407 ntBASIC2.62□□□□□ -1.99
LSM1O15116 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM1O15116 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM1O15116 AL139276.1-201ENST00000311910 1001 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MIR514A1-201ENST00000385133 98 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AL513475.1-201ENST00000406602 315 ntBASIC2.62□□□□□ -1.99
LSM1O15116 Z85995.1-201ENST00000415547 335 ntBASIC2.62□□□□□ -1.99
LSM1O15116 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM1O15116 AC112220.1-201ENST00000434628 355 ntBASIC2.62□□□□□ -1.99
LSM1O15116 ST13P20-201ENST00000447996 1065 ntBASIC2.62□□□□□ -1.99
LSM1O15116 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.62□□□□□ -1.99
LSM1O15116 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM1O15116 RNU7-23P-201ENST00000459465 62 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM1O15116 AC114981.1-201ENST00000503897 678 ntBASIC2.62□□□□□ -1.99
LSM1O15116 OR5BM1P-201ENST00000512021 366 ntBASIC2.62□□□□□ -1.99
LSM1O15116 RNU6-528P-201ENST00000516926 100 ntBASIC2.62□□□□□ -1.99
LSM1O15116 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
LSM1O15116 RN7SKP57-201ENST00000517248 293 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM1O15116 AC007115.1-201ENST00000546853 234 ntBASIC2.62□□□□□ -1.99
LSM1O15116 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM1O15116 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM1O15116 AC090888.1-201ENST00000561335 1141 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AC068135.2-201ENST00000569293 1028 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MTND4LP25-201ENST00000570218 163 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MIR5195-201ENST00000583555 115 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM1O15116 AC008507.2-201ENST00000588402 1176 ntBASIC2.62□□□□□ -1.99
LSM1O15116 VN1R78P-201ENST00000597393 564 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AL390838.2-201ENST00000602394 274 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AP001429.1-201ENST00000602568 530 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AC008277.2-201ENST00000605196 797 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AP000943.4-201ENST00000622912 357 ntBASIC2.62□□□□□ -1.99
LSM1O15116 CRYM-AS1-204ENST00000637983 556 ntBASIC2.62□□□□□ -1.99
LSM1O15116 AC005539.1-201ENST00000443768 1479 ntBASIC2.62□□□□□ -1.99
LSM1O15116 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LSM1O15116 AC109315.1-201ENST00000584143 1347 ntBASIC2.62□□□□□ -1.99
LSM1O15116 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM1O15116 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM1O15116 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
LSM1O15116 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 SNORD46.1-201ENST00000364139 104 ntBASIC2.61□□□□□ -1.99
LSM1O15116 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 SET-203ENST00000372688 801 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM1O15116 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
LSM1O15116 RNU6-193P-201ENST00000410977 107 ntBASIC2.61□□□□□ -1.99
LSM1O15116 EEF1A1P41-201ENST00000414667 207 ntBASIC2.61□□□□□ -1.99
LSM1O15116 SPA17P1-201ENST00000416656 452 ntBASIC2.61□□□□□ -1.99
LSM1O15116 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM1O15116 AL513175.2-201ENST00000422071 443 ntBASIC2.61□□□□□ -1.99
LSM1O15116 RPL35AP12-201ENST00000425362 338 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AL451062.2-201ENST00000427515 271 ntBASIC2.61□□□□□ -1.99
LSM1O15116 RPL7L1P10-201ENST00000427790 463 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AL356867.1-201ENST00000429623 299 ntBASIC2.61□□□□□ -1.99
LSM1O15116 ARPC3P1-201ENST00000437218 533 ntBASIC2.61□□□□□ -1.99
LSM1O15116 USP9YP22-201ENST00000438971 294 ntBASIC2.61□□□□□ -1.99
LSM1O15116 MTCYBP3-201ENST00000445588 1137 ntBASIC2.61□□□□□ -1.99
LSM1O15116 BMI1P1-201ENST00000445879 941 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.61□□□□□ -1.99
LSM1O15116 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LSM1O15116 AC006499.2-201ENST00000513470 337 ntBASIC2.61□□□□□ -1.99
LSM1O15116 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM1O15116 RNA5SP341-201ENST00000516261 117 ntBASIC2.61□□□□□ -1.99
LSM1O15116 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM1O15116 AC022861.1-201ENST00000522981 663 ntBASIC2.61□□□□□ -1.99
LSM1O15116 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.61□□□□□ -1.99
LSM1O15116 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms