Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SDCBPO00560 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SDCBPO00560 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SDCBPO00560 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SDCBPO00560 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SDCBPO00560 AL596028.1-201ENST00000326971 197 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SDCBPO00560 HSPE1P11-201ENST00000339579 310 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 RNU6-619P-201ENST00000365146 108 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 MIR525-201ENST00000384978 85 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SDCBPO00560 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SDCBPO00560 AL023807.1-201ENST00000407932 359 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 RNU6-193P-201ENST00000410977 107 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 PTP4A1P7-201ENST00000423476 514 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 SRIP2-201ENST00000428470 166 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC004866.2-201ENST00000438285 481 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC092170.1-201ENST00000440211 356 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 IPO7P1-201ENST00000442031 636 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SDCBPO00560 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.76□□□□□ -2.13
SDCBPO00560 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 snoU13.28-201ENST00000459235 104 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 NAP1L1P3-201ENST00000462291 880 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 RNA5SP364-201ENST00000516938 78 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 LSM6P2-201ENST00000552208 177 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 SNRPGP18-201ENST00000553000 214 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.76□□□□□ -2.13
SDCBPO00560 AC104229.1-201ENST00000561364 255 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC009063.1-201ENST00000563342 702 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 MIR4658-201ENST00000584344 65 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.76□□□□□ -2.13
SDCBPO00560 AL022099.1-201ENST00000604551 712 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 VN1R74P-201ENST00000613259 503 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AL450472.3-201ENST00000615578 367 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 UCA1.1-201ENST00000620952 75 ntBASIC1.76□□□□□ -2.13
SDCBPO00560 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.76□□□□□ -2.13
SDCBPO00560 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SDCBPO00560 RNU4-82P-201ENST00000362443 140 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 RNU6-1155P-201ENST00000363554 107 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 SNORD56.4-201ENST00000363883 71 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 RNU6-461P-201ENST00000364195 107 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 RNU6-173P-201ENST00000364215 104 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 U3.20-201ENST00000390909 217 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 CR848007.2-201ENST00000424918 787 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 PGBD4P3-201ENST00000440731 581 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 AL691517.1-201ENST00000440833 1235 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 USP9YP8-201ENST00000441913 500 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 RNF2P1-201ENST00000442955 1010 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.75□□□□□ -2.13
SDCBPO00560 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.75□□□□□ -2.13
SDCBPO00560 RPL31P60-201ENST00000478450 367 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 OR52A4P-202ENST00000481634 799 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.75□□□□□ -2.13
SDCBPO00560 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.75□□□□□ -2.13
SDCBPO00560 AC025755.1-201ENST00000521306 278 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.75□□□□□ -2.13
SDCBPO00560 OR5AK1P-201ENST00000524837 922 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 ZNF705CP-201ENST00000530515 889 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.75□□□□□ -2.13
SDCBPO00560 AP002770.2-201ENST00000543613 532 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.75□□□□□ -2.13
SDCBPO00560 NIFKP8-201ENST00000560500 874 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 RPS3AP23-202ENST00000574601 686 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 AC011260.1-201ENST00000578420 472 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 BPTFP1-201ENST00000579209 492 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.75□□□□□ -2.13
SDCBPO00560 AC133794.1-201ENST00000602731 914 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 AC012443.1-201ENST00000605605 231 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SDCBPO00560 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SDCBPO00560 AC008669.1-201ENST00000565823 2178 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 MTND5P6-201ENST00000422338 1798 ntBASIC1.75□□□□□ -2.13
SDCBPO00560 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.74□□□□□ -2.13
SDCBPO00560 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.74□□□□□ -2.13
SDCBPO00560 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SDCBPO00560 RNU6-270P-201ENST00000364131 105 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 RNA5SP354-201ENST00000391247 136 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.74□□□□□ -2.13
SDCBPO00560 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.74□□□□□ -2.13
SDCBPO00560 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.74□□□□□ -2.13
SDCBPO00560 AC005345.1-201ENST00000431868 217 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 ARPC3P1-201ENST00000437218 533 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.74□□□□□ -2.13
SDCBPO00560 AL445687.1-201ENST00000439946 251 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 RPL23AP16-201ENST00000441715 421 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 MTCO3P2-201ENST00000457365 171 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 snoU109.4-201ENST00000458953 143 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 AC090515.1-201ENST00000465295 476 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 AC017037.2-201ENST00000513850 890 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.74□□□□□ -2.13
SDCBPO00560 AP001317.1-201ENST00000531194 960 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms