Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CCNG1P1-201ENST00000406783 885 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 SNORA11B-201ENST00000408175 129 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 MIR320C1-201ENST00000408566 88 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 SNORD88.1-201ENST00000408684 91 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 USP9YP13-201ENST00000417797 480 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL513175.2-201ENST00000422071 443 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 MTCO3P45-201ENST00000443036 613 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 RPL23AP20-201ENST00000447965 421 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 DPPA3P1-201ENST00000448050 469 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 MTCO1P27-201ENST00000448269 226 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL031313.1-201ENST00000448435 256 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL049829.1-201ENST00000465411 156 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC110760.3-202ENST00000515177 371 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC023538.1-201ENST00000534576 736 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC060771.1-201ENST00000582031 164 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 UBE2L4-201ENST00000587688 464 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 VN1R92P-201ENST00000598511 928 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL596327.1-201ENST00000603629 213 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL590392.1-201ENST00000604960 446 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL627309.6-201ENST00000606857 840 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL136295.6-201ENST00000610486 658 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC245517.5-201ENST00000611529 162 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC034102.8-201ENST00000615146 484 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC009464.1-201ENST00000615731 469 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC007318.2-201ENST00000620999 243 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL158801.5-201ENST00000623123 465 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AL355480.1-201ENST00000629041 99 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.19□□□□□ -2.06
SMKR1H3BMG3 AC135776.4-201ENST00000624300 1904 ntBASIC2.19□□□□□ -2.06
SMKR1H3BMG3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RNU6-853P-201ENST00000364306 107 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RN7SKP226-201ENST00000364912 300 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 MIR323B-201ENST00000385269 82 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL590004.2-201ENST00000404787 371 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC083875.1-201ENST00000419509 405 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPS15AP5-201ENST00000436276 388 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPS29P6-201ENST00000438196 145 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC122718.1-201ENST00000439448 744 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL445687.1-201ENST00000439946 251 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPL21P23-201ENST00000446654 460 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 TPT1P14-201ENST00000448018 505 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPL26P9-201ENST00000457466 433 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC107626.1-201ENST00000471084 183 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPS27AP9-201ENST00000477681 438 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RPL21P13-201ENST00000488305 481 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC034222.1-201ENST00000494052 532 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 RNA5SP216-201ENST00000516111 123 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 MIR3117-201ENST00000584034 78 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AL606834.2-201ENST00000602954 668 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC073657.2-201ENST00000605661 303 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC140725.3-201ENST00000616193 880 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC244100.1-202ENST00000621554 382 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC009039.2-201ENST00000624524 529 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms