Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RPL30P9-201ENST00000465586 330 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1□□□□□ -2.25
LINC01549A6NIU2 SETP6-201ENST00000479329 568 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1□□□□□ -2.25
LINC01549A6NIU2 RNU1-103P-201ENST00000516502 125 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1□□□□□ -2.25
LINC01549A6NIU2 ATP5F1P5-201ENST00000526403 760 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 GLYCAM1-201ENST00000546596 285 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1□□□□□ -2.25
LINC01549A6NIU2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC018755.4-201ENST00000619715 454 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AL356432.1-201ENST00000405809 419 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC027575.1-201ENST00000481064 460 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 LDHBP3-201ENST00000514909 822 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 RN7SKP277-201ENST00000516895 283 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AP005902.1-201ENST00000521358 186 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 HMGB1P1-201ENST00000522557 636 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC087276.1-201ENST00000529659 480 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AK6P1-201ENST00000540219 478 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC106734.1-201ENST00000568646 663 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC092474.3-201ENST00000603022 568 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC103881.1-201ENST00000603476 538 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC069304.3-201ENST00000603938 1084 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 OR10AB1P-201ENST00000609613 938 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC103710.2-201ENST00000609912 942 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AL449363.1-201ENST00000617815 186 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 AC007998.5-201ENST00000622938 237 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC0.99□□□□□ -2.25
LINC01549A6NIU2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.99□□□□□ -2.25
LINC01549A6NIU2 MTND4P23-201ENST00000447723 1363 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 RNU6-203P-201ENST00000384038 104 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 MIR150-201ENST00000385048 84 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 SNORA67.6-201ENST00000391093 99 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AL590084.1-201ENST00000407885 387 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 RNU2-41P-201ENST00000410991 178 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 SEPT2P1-201ENST00000419651 180 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC004383.1-201ENST00000438135 289 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 EEF1B2P7-201ENST00000451177 676 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 RPL23AP3-201ENST00000453844 468 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC008481.1-201ENST00000463278 396 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC104687.1-201ENST00000485829 412 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC017037.2-201ENST00000513850 890 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC084033.1-201ENST00000550830 633 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC040174.2-201ENST00000602701 465 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AP001485.1-201ENST00000604799 199 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC093673.2-201ENST00000609674 331 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AL590808.1-201ENST00000618696 141 ntBASIC0.98□□□□□ -2.25
LINC01549A6NIU2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.98□□□□□ -2.25
LINC01549A6NIU2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC131280.1-202ENST00000624067 4211 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 CR848007.1-201ENST00000442354 1699 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 MIR23B-201ENST00000384832 97 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC098592.2-201ENST00000413158 265 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 SMC4P1-201ENST00000414479 527 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC244453.4-201ENST00000419150 388 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC246680.2-201ENST00000422106 389 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC244035.1-201ENST00000430042 390 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 GTF2IP7-202ENST00000436677 309 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 RPS29P28-201ENST00000446439 141 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 snoU13.4-201ENST00000458916 104 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC096751.1-202ENST00000502691 1067 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 AC064859.1-201ENST00000624741 174 ntBASIC0.97□□□□□ -2.25
LINC01549A6NIU2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC01549A6NIU2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
LINC01549A6NIU2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms