Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC126389.1-201ENST00000477436 290 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 RPS27AP9-201ENST00000477681 438 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC118465.1-201ENST00000513820 1271 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 RNU5A-4P-201ENST00000516588 111 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 EEF1B2P4-201ENST00000551398 348 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 HSPE1P3-201ENST00000559254 309 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 MIR4298-201ENST00000584380 73 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC023043.3-201ENST00000593113 385 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AL391001.1-201ENST00000602747 715 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 NRBF2P5-201ENST00000603087 788 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 RPL23AP92-201ENST00000603609 255 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC063944.3-201ENST00000609969 533 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC245297.2-201ENST00000610119 565 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC097478.2-201ENST00000610572 514 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AL020991.1-201ENST00000612314 373 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC140725.3-201ENST00000616193 880 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC004943.3-201ENST00000624116 600 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
TRAV40A0A0B4J280 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
TRAV40A0A0B4J280 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RPL9P7-201ENST00000330965 580 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 SNORA4.1-201ENST00000364263 144 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MIR181B1-201ENST00000385240 110 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL139039.1-201ENST00000401900 692 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RAD23BP2-201ENST00000416003 1207 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MTCYBP38-201ENST00000417160 1123 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL953862.1-201ENST00000423016 168 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 TXNL1P1-201ENST00000429528 554 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MUPP-201ENST00000438111 566 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RABEPKP1-201ENST00000440529 1026 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RPL39P40-201ENST00000445481 146 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC002381.1-201ENST00000447049 280 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MTND1P31-201ENST00000449206 961 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL139824.2-201ENST00000458731 1095 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC092451.1-201ENST00000480211 153 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC096751.1-202ENST00000502691 1067 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC006390.1-201ENST00000508068 283 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC093281.2-201ENST00000510153 597 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LTV1P1-201ENST00000510683 1237 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 MTCYBP43-201ENST00000513621 740 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RNA5SP76-201ENST00000516277 87 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-1073P-201ENST00000517182 106 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC008277.2-201ENST00000605196 797 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL627309.6-201ENST00000606857 840 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC021755.4-201ENST00000616620 456 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.21□□□□□ -2.06
TRAV40A0A0B4J280 FAM35BP-202ENST00000497389 3337 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 FRG1BP-201ENST00000278882 761 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms