Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 IGKV2-36-201ENST00000519999 223 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AP005435.4-201ENST00000529514 284 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 OR4R1P-201ENST00000529879 463 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 TVP23BP1-201ENST00000557500 617 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC090312.2-201ENST00000582687 378 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 MIR4424-201ENST00000585257 86 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AP001029.3-201ENST00000588063 596 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 RPL7P50-201ENST00000600588 727 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC016727.2-201ENST00000603988 621 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC007485.1-201ENST00000616755 206 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC131238.1-201ENST00000617135 328 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 uc_338.11-201ENST00000619132 160 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AL162373.1-201ENST00000620433 407 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC098657.3-201ENST00000620434 263 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HS3ST3A1Q9Y663 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.73
HS3ST3A1Q9Y663 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC097504.1-201ENST00000515103 2415 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC009229.4-201ENST00000623854 1947 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 Z95327.2-201ENST00000414579 1873 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 Y_RNA.414-201ENST00000384011 101 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC097374.1-203ENST00000400783 485 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNA5SP317-201ENST00000410176 116 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNU2-6P-201ENST00000411404 190 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 EIF4A1P3-201ENST00000411521 244 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RPL7P10-201ENST00000417407 739 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RPL17P36-201ENST00000420302 549 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 SKA2P1-201ENST00000425592 390 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 CEACAMP1-201ENST00000434624 1035 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 FABP5P14-201ENST00000437273 393 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 HSFY6P-201ENST00000445573 403 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RPL21P71-201ENST00000465598 459 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RPL21P99-201ENST00000480369 423 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RPS27AP13-201ENST00000498403 237 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 HMGB3P17-201ENST00000504195 649 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC099522.1-202ENST00000514718 367 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNU6-976P-201ENST00000516086 111 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 HMGB1P19-201ENST00000517578 577 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AF038458.1-201ENST00000588406 262 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 VN1R85P-201ENST00000601587 426 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AL592436.1-201ENST00000605135 558 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC018889.1-201ENST00000605372 397 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AL591034.3-201ENST00000605511 685 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 OR10AB1P-201ENST00000609613 938 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC116447.1-201ENST00000613153 453 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC078938.1-201ENST00000620993 318 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC112484.5-201ENST00000624189 228 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC004972.1-201ENST00000623934 2209 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 AC139713.2-215ENST00000641428 5037 ntBASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
HS3ST3A1Q9Y663 MTND5P30-201ENST00000452896 1731 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms