Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC008083.4-201ENST00000615076 444 ntBASIC3.13□□□□□ -1.91
USP16Q9Y5T5 MIR4509-1-201ENST00000618224 94 ntBASIC3.13□□□□□ -1.91
USP16Q9Y5T5 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.13□□□□□ -1.91
USP16Q9Y5T5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.13□□□□□ -1.91
USP16Q9Y5T5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP16Q9Y5T5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.13□□□□□ -1.91
USP16Q9Y5T5 AC007336.1-201ENST00000576365 3828 ntBASIC3.13□□□□□ -1.91
USP16Q9Y5T5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 snoZ40.1-201ENST00000364540 72 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 SNORD116-12-201ENST00000384468 92 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 FNDC3CP-201ENST00000420795 1155 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AC104164.3-201ENST00000467363 1258 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 SNORA31.20-201ENST00000517111 133 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 RNU6-1261P-201ENST00000517194 104 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 AL391262.2-201ENST00000622466 494 ntBASIC3.12□□□□□ -1.91
USP16Q9Y5T5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP16Q9Y5T5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 SNORD82-201ENST00000365530 70 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 RN7SKP223-201ENST00000410582 62 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC006548.1-201ENST00000427470 102 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 RPL31P54-201ENST00000429803 370 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 FAM103A2P-201ENST00000444122 354 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 COX6CP2-201ENST00000444980 225 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 RPS20P24-201ENST00000457473 361 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 PABPC1P3-201ENST00000469174 459 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 HMGN2P13-201ENST00000476476 274 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 HMGB1P22-201ENST00000505315 124 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC010460.2-201ENST00000509054 677 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC026436.1-201ENST00000510537 270 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC138915.2-201ENST00000569776 97 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 VN1R83P-201ENST00000595685 445 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC103810.6-201ENST00000606708 136 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AL590282.1-201ENST00000610379 1136 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 TUG1_1.1-201ENST00000610654 145 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AL138478.1-201ENST00000612252 832 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AL121895.2-201ENST00000619558 447 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC006963.1-201ENST00000624003 1052 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 CR381572.1-201ENST00000625098 102 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 CYP3A51P-201ENST00000633513 256 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 CRYM-AS1-204ENST00000637983 556 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 AC107982.1-201ENST00000507171 1300 ntBASIC3.11□□□□□ -1.91
USP16Q9Y5T5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 CDR1-202ENST00000625883 1485 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RNA5SP432-201ENST00000362480 116 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RNA5SP258-201ENST00000362750 119 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RNU5D-1-201ENST00000363299 116 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SNORA40.2-201ENST00000390847 128 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AL354719.1-201ENST00000406535 843 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTATP6P20-201ENST00000414147 562 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 LUZP4P1-201ENST00000415420 344 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTCO3P12-201ENST00000416718 547 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AL513175.2-201ENST00000422071 443 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AL139415.2-201ENST00000431968 163 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTCYBP11-201ENST00000447254 1109 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RPS24P6-201ENST00000452670 400 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RFC5P1-201ENST00000454419 874 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTCO2P32-201ENST00000514865 403 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RNU1-61P-201ENST00000516107 151 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 RNA5SP281-201ENST00000516504 135 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms