Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
R3HCC1Q9Y3T6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
R3HCC1Q9Y3T6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL391684.1-202ENST00000641293 1636 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC079741.1-201ENST00000321498 212 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-552P-201ENST00000362869 119 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-179P-201ENST00000363350 107 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 Y_RNA.157-201ENST00000363638 102 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNU4-20P-201ENST00000365601 151 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-1009P-201ENST00000390996 107 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNA5SP397-201ENST00000391323 118 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 SDHCP2-201ENST00000398565 501 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-373P-201ENST00000411247 98 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC245028.1-201ENST00000423259 256 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RAC1P6-201ENST00000423911 575 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL513533.1-201ENST00000453728 415 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RN7SL738P-201ENST00000470264 297 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 RPL38P4-201ENST00000502376 214 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AP004371.1-201ENST00000525240 214 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AL117336.2-201ENST00000602435 335 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 C8orf59P2-201ENST00000603441 271 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC068831.8-201ENST00000620171 435 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC099654.5-201ENST00000636479 350 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 AC116667.1-201ENST00000604855 2072 ntBASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
R3HCC1Q9Y3T6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 TAB3P1-202ENST00000452645 1634 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AL139276.1-201ENST00000311910 1001 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-694P-201ENST00000364071 147 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SNORD113.2-201ENST00000364166 89 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-701P-201ENST00000384059 107 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SOD2P1-201ENST00000396543 562 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RPL32P23-201ENST00000397237 405 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 TXNP7-201ENST00000406296 293 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SRIP2-201ENST00000428470 166 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RPL23AP25-201ENST00000430973 463 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 MTND1P18-201ENST00000448191 573 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 MTND3P16-201ENST00000452205 344 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC092001.1-201ENST00000453012 261 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RN7SL432P-201ENST00000484057 298 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 VN1R105P-201ENST00000486595 910 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RNA5SP497-201ENST00000516081 97 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RNU6-390P-201ENST00000516259 103 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RNA5SP503-201ENST00000517047 117 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SNORA31.20-201ENST00000517111 133 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 NARSP2-201ENST00000518524 679 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AC023050.3-201ENST00000541142 333 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 MIR4703-201ENST00000577728 79 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 RN7SL690P-201ENST00000582087 240 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 SNRPGP15-201ENST00000600149 222 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 AL589994.2-201ENST00000621124 579 ntBASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
R3HCC1Q9Y3T6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
R3HCC1Q9Y3T6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
R3HCC1Q9Y3T6 Y_RNA.72-201ENST00000362894 103 ntBASIC4.96□□□□□ -1.62
R3HCC1Q9Y3T6 SNORD115-7-201ENST00000365306 82 ntBASIC4.96□□□□□ -1.62
R3HCC1Q9Y3T6 RNU6-946P-201ENST00000383878 107 ntBASIC4.96□□□□□ -1.62
R3HCC1Q9Y3T6 RNU6-76P-201ENST00000384060 104 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms