Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC007954.1-201ENST00000554198 494 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 CYCSP39-201ENST00000565821 309 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 MIR4635-201ENST00000583759 79 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC097504.2-201ENST00000608088 454 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 BX664608.1-201ENST00000610519 487 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC079228.1-201ENST00000624774 1049 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 U6.101-201ENST00000637707 76 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AP000526.1-201ENST00000603308 1388 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC008669.1-201ENST00000565823 2178 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 SNORD46.1-201ENST00000364139 104 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 RNA5SP210-201ENST00000391034 120 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 RNU2-42P-201ENST00000410697 113 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 MRPS36P1-201ENST00000421291 307 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 MTND2P9-201ENST00000422293 931 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 MTCO1P53-201ENST00000441633 699 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 MTND5P4-201ENST00000514978 288 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AL049838.1-201ENST00000563647 981 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 MTND3P13-201ENST00000574391 343 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AL160237.3-201ENST00000604114 1013 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AP002826.1-201ENST00000608835 315 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC024257.5-201ENST00000612739 531 ntBASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SMC3Q9UQE7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 OR4G11P-202ENST00000642116 1414 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RNU5E-10P-201ENST00000363506 118 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RNU1-112P-201ENST00000364401 164 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RNU1-138P-201ENST00000384093 164 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 SNRPEP2-201ENST00000397592 279 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RPL7P44-201ENST00000424827 742 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC234781.2-201ENST00000426370 994 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC092427.1-201ENST00000439177 601 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 OR10R1P-201ENST00000441524 1141 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RAC1P7-201ENST00000445367 377 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AP000852.1-201ENST00000472460 573 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC108734.3-201ENST00000481241 1165 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 UBE2V1P12-201ENST00000503954 474 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC113347.3-201ENST00000509113 148 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC006445.2-201ENST00000510061 472 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RNU6-1225P-201ENST00000516336 65 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC100870.1-201ENST00000522035 505 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 SNHG22-203ENST00000617833 660 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 AC004777.1-201ENST00000624317 287 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.12□□□□□ -1.91
SMC3Q9UQE7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC3Q9UQE7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 CDR1-202ENST00000625883 1485 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 RNU2-47P-201ENST00000410649 186 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AL161449.1-201ENST00000414531 1199 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC006946.1-201ENST00000429106 328 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AL358794.1-201ENST00000445689 381 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 RPL39P6-201ENST00000448289 150 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 RSL24D1P3-201ENST00000449255 495 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 SNRPGP6-201ENST00000451124 220 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 CACYBPP2-201ENST00000453625 678 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC008571.1-201ENST00000467232 300 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms