Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SNORA41-201ENST00000384675 132 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 RNU6-754P-201ENST00000391166 107 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 RNU2-38P-201ENST00000410856 79 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AC011933.1-201ENST00000413334 321 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 RPL21P103-201ENST00000479921 488 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 VN1R104P-201ENST00000505115 1009 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 Y_RNA.689-201ENST00000516589 107 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AC012339.2-201ENST00000523996 453 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AP001880.2-201ENST00000538233 448 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 SETP7-201ENST00000552169 453 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 MIR4458-201ENST00000578872 75 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AL031176.1-201ENST00000604554 466 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 AC008758.3-201ENST00000507003 1829 ntBASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZC3H4Q9UPT8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZC3H4Q9UPT8 RNU1-35P-201ENST00000362782 153 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 Y_RNA.117-201ENST00000363294 101 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 SNORA20.1-201ENST00000364790 130 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 RNU6-842P-201ENST00000384269 107 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 MIR517A-201ENST00000385001 87 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 AC008065.1-201ENST00000428525 348 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 RN7SL197P-201ENST00000466981 299 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 AC093840.1-201ENST00000511599 336 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 RN7SKP40-201ENST00000517211 242 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 HSPE1P20-201ENST00000538133 289 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 AP005432.2-201ENST00000608162 586 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 uc_338.7-201ENST00000621834 124 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 BMS1P21-201ENST00000634565 365 ntBASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZC3H4Q9UPT8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC138393.1-203ENST00000327086 343 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 Y_RNA.222-201ENST00000364264 102 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 Y_RNA.483-201ENST00000384380 101 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 RPL21P1-201ENST00000399532 476 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 MTND5P15-201ENST00000434246 349 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 NOTCH2P1-201ENST00000443481 624 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 SNORD127-201ENST00000458892 86 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC010631.1-201ENST00000474150 156 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 HMGB3P17-201ENST00000504195 649 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 GLUD1P3-202ENST00000508551 200 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC007224.1-201ENST00000564410 144 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC006363.1-201ENST00000603806 463 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 TUG1_2.1-201ENST00000614234 87 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC137590.2-201ENST00000619709 240 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 AC108751.5-201ENST00000492880 1336 ntBASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZC3H4Q9UPT8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 RNU1-64P-201ENST00000365443 163 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 RNA5SP187-201ENST00000384400 119 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 MT-TW-201ENST00000387382 68 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 MIR548M-201ENST00000408260 86 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC092809.3-201ENST00000415453 231 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 HMGN2P27-201ENST00000427352 270 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AL353997.1-201ENST00000432936 108 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 FTH1P25-201ENST00000447665 469 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms