Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SNORD62.1-201ENST00000362541 86 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 Y_RNA.106-201ENST00000363189 100 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNA5SP123-201ENST00000363244 119 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-715P-201ENST00000365204 103 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-637P-201ENST00000384050 107 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-472P-201ENST00000384299 107 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AC005522.1-201ENST00000395416 346 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU2-64P-201ENST00000411315 191 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 USP9YP30-201ENST00000430729 455 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 MRPS18BP2-201ENST00000434310 759 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AP001086.1-201ENST00000494882 321 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 HMGB3P16-201ENST00000508037 287 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-408P-201ENST00000515910 100 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-1143P-201ENST00000516125 104 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RNU6-323P-201ENST00000521915 107 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 BNIP3P1-201ENST00000547295 580 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SNORA74C-1-201ENST00000580726 201 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL512605.2-201ENST00000592972 256 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL021879.1-201ENST00000611756 288 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL161423.1-201ENST00000613700 262 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SNHG22-203ENST00000617833 660 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL589994.2-201ENST00000621124 579 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AP001784.1-201ENST00000624107 428 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL137003.2-201ENST00000606924 2538 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 MTND5P27-201ENST00000428871 1720 ntBASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
AP4E1Q9UPM8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 INTS6P1-201ENST00000504674 2530 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AP000542.2-201ENST00000623199 6179 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC000374.1-201ENST00000434698 1745 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RNU6-209P-201ENST00000384118 107 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RNU6-434P-201ENST00000384376 107 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 Y_RNA.485-201ENST00000384395 102 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 ENSAP1-201ENST00000392855 326 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 MRPS18CP6-201ENST00000423587 223 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC112498.1-201ENST00000444401 332 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC002553.2-201ENST00000453217 340 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC009901.1-201ENST00000506703 541 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RNU2-53P-201ENST00000516257 147 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RNY3P15-201ENST00000516297 97 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 RNU6-709P-201ENST00000517257 104 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 IGLVIV-53-201ENST00000520107 367 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC023157.2-201ENST00000540596 141 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC063949.1-201ENST00000552900 865 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC110743.1-201ENST00000584870 478 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AL670379.4-201ENST00000605279 254 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC020634.1-201ENST00000608701 549 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 AC068870.2-201ENST00000620635 389 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 MIR8062-201ENST00000621515 85 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 MIR6719-201ENST00000622428 87 ntBASIC5.04□□□□□ -1.6
AP4E1Q9UPM8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms